Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000005212
NCBI Reference Sequence	XM_002123985.4
NCBI Reference Sequence	XM_018817396.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg085f21

Plate: R1CiGC40d15

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Actin	SMART	Actin family
Actin	PANTHER	Actin family
Actin	PRINTS	Actin family
Actin	Pfam	Actin family
Actin_CS	ProSitePatterns	Actin, conserved site

GOSlim

46 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription coactivator activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Blast	molecular function
extracellular space	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Blast	cellular component
DNA repair	Orthology	biological process
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
signal transduction	Orthology	biological process
nervous system development	Orthology	biological process
membrane	Blast	cellular component
protein kinase binding	Blast	molecular function
vesicle	Blast	cellular component
macromolecular complex	Orthology	cellular component
identical protein binding	Blast	molecular function
extracellular exosome	Blast	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
animal organ development	Orthology	biological process
organelle organization	Orthology	biological process
structural molecule activity	Orthology	molecular function
DNA metabolic process	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
central nervous system development	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
DNA binding	Orthology	molecular function
nucleoplasm part	Orthology	cellular component
cellular protein modification process	Orthology	biological process
neuron part	Orthology	cellular component
cytoskeletal protein binding	Blast	molecular function
transcription factor binding	Blast	molecular function
cytoplasmic part	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear chromatin	Hs	cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
neural retina development	Hs	biological process
chromatin binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
plasma membrane	Hs	cellular component
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
chromatin organization	Hs	biological process
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
cytoskeleton organization	Hs	biological process
signal transduction	Hs	biological process
nervous system development	Hs	biological process
SWI/SNF complex	Hs	cellular component
protein deubiquitination	Hs	biological process
spinal cord development	Hs	biological process
Ino80 complex	Hs	cellular component
nucleosomal DNA binding	Hs	molecular function
macromolecular complex	Hs	cellular component
NuA4 histone acetyltransferase complex	Hs	cellular component
regulation of growth	Hs	biological process
ATP-dependent chromatin remodeling	Hs	biological process
histone H4 acetylation	Hs	biological process
histone H2A acetylation	Hs	biological process
npBAF complex	Hs	cellular component
nBAF complex	Hs	cellular component

GO (Blast)

39 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	224	2.06e-69
nuclear chromatin	Hs	cellular component	580	0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	580	0.0
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	580	0.0
chromatin binding	Hs	molecular function	580	0.0
transcription coactivator activity	Hs	molecular function	581	0.0
structural constituent of cytoskeleton	Hs	molecular function	581	0.0
protein binding	Hs	molecular function	580	0.0
ATP binding	Hs	molecular function	224	2.06e-69
extracellular space	Hs	cellular component	224	2.06e-69
nucleus	Hs	cellular component	581	0.0
nucleoplasm	Hs	cellular component	580	0.0
nucleolus	Hs	cellular component	581	0.0
cytoplasm	Hs	cellular component	224	2.06e-69
cytosol	Hs	cellular component	224	2.06e-69
cytoskeleton	Hs	cellular component	224	2.06e-69
plasma membrane	Hs	cellular component	580	0.0
focal adhesion	Hs	cellular component	224	2.06e-69
actin cytoskeleton	Hs	cellular component	224	2.06e-69
membrane	Hs	cellular component	224	2.06e-69
SWI/SNF complex	Hs	cellular component	581	0.0
kinesin binding	Hs	molecular function	224	2.06e-69
protein kinase binding	Hs	molecular function	224	2.06e-69
intracellular ribonucleoprotein complex	Hs	cellular component	224	2.06e-69
Tat protein binding	Hs	molecular function	224	2.06e-69
Ino80 complex	Hs	cellular component	580	0.0
nucleosomal DNA binding	Hs	molecular function	580	0.0
vesicle	Hs	cellular component	224	2.06e-69
macromolecular complex	Hs	cellular component	580	0.0
NuA4 histone acetyltransferase complex	Hs	cellular component	580	0.0
cytoplasmic ribonucleoprotein granule	Hs	cellular component	224	2.06e-69
identical protein binding	Hs	molecular function	224	2.06e-69
nitric-oxide synthase binding	Hs	molecular function	224	2.06e-69
extracellular exosome	Hs	cellular component	224	2.06e-69
npBAF complex	Hs	cellular component	580	0.0
nBAF complex	Hs	cellular component	581	0.0
blood microparticle	Hs	cellular component	224	2.06e-69
dense body	Hs	cellular component	224	2.06e-69
structural constituent of postsynaptic actin cytoskeleton	Hs	molecular function	224	2.06e-69

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences