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GENE CARD

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Gene Card

Best human hits

CAP1; CAP2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004401

Gene Model ID

KH2012:KH.C2.223

Location

KhC2:5917477..5923670

Transcript Models and Sequences

  KH2012:KH.C2.223.v1.A.nonSL5-1
KH2012:KH.C2.223.v1.A.SL1-1
KH2012:KH.C2.223.v1.A.SL2-1
KH2012:KH.C2.223.v1.A.SL4-1
KH2012:KH.C2.223.v2.A.ND3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000022162
NCBI Reference Sequence XM_018817681.1
Collections

Gateway full ORF

2 results

cien47031

Plate: VES77_B17

cima8114991

Plate: VES74_F11

Gene collection 1 (N. Satoh)

2 results

citb028n11

Plate: R1CiGC31k06

citb046l12

Plate: R1CiGC45p13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
CAP_N_sf Gene3D Adenylate cyclase-associated CAP, N-terminal domain superfamily
CARP_motif SMART CARP motif
Adenylate_cyclase-assoc_CAP_N Pfam Adenylate cyclase-associated CAP, N-terminal
CAP_N_sf SUPERFAMILY Adenylate cyclase-associated CAP, N-terminal domain superfamily
Adenylate_cyclase-assoc_CAP PANTHER Adenylate cyclase-associated CAP
C-CAP_CF_C-like ProSiteProfiles C-CAP/cofactor C-like domain
CAP_C_sf SUPERFAMILY Adenylate cyclase-associated CAP, C-terminal superfamily
CAP/MinC_C Gene3D Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal
Adenylate_cyclase-assoc_CAP_C Pfam Adenylate cyclase-associated CAP, C-terminal

GOSlim

29 results

GO Term Annotation Origin Type
cell morphogenesis Orthology biological process
actin binding Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
cytoplasm Orthology cellular component
plasma membrane Orthology cellular component
focal adhesion Orthology cellular component
signal transduction Orthology biological process
membrane Orthology cellular component
identical protein binding Orthology molecular function
extracellular exosome Orthology cellular component
cell migration Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
cellular process Orthology biological process
regulation of catalytic activity Orthology biological process
enzyme binding Orthology molecular function
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
cell periphery Orthology cellular component
cytoplasmic part Orthology cellular component
cytoskeletal part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
lysosome Orthology cellular component
vacuolar part Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
cell morphogenesis Hs biological process
ameboidal-type cell migration Hs biological process
actin binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
cytoplasm Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
receptor-mediated endocytosis Hs biological process
cytoskeleton organization Hs biological process
establishment or maintenance of cell polarity Hs biological process
signal transduction Hs biological process
activation of adenylate cyclase activity Hs biological process
actin polymerization or depolymerization Hs biological process
adenylate cyclase binding Hs molecular function
postsynaptic density Hs cellular component
membrane Hs cellular component
actin cytoskeleton organization Hs biological process
cortical actin cytoskeleton Hs cellular component
azurophil granule lumen Hs cellular component
identical protein binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
actin binding Hs molecular function 323 9.30e-106
protein binding Hs molecular function 307 1.28e-99
extracellular region Hs cellular component 323 9.30e-106
extracellular space Hs cellular component 323 9.30e-106
cytoplasm Hs cellular component 323 9.30e-106
plasma membrane Hs cellular component 323 9.30e-106
focal adhesion Hs cellular component 323 9.30e-106
adenylate cyclase binding Hs molecular function 323 9.30e-106
postsynaptic density Hs cellular component 307 1.28e-99
membrane Hs cellular component 323 9.30e-106
cortical actin cytoskeleton Hs cellular component 323 9.30e-106
azurophil granule lumen Hs cellular component 323 9.30e-106
identical protein binding Hs molecular function 307 1.28e-99
extracellular exosome Hs cellular component 323 9.30e-106

GO (InterProScan)

3 results

GO Term Analysis Type e-value
cell morphogenesis Gene3D biological process 1.4E-64
actin binding PANTHER molecular function 2.8E-154
cytoskeleton organization PANTHER biological process 2.8E-154

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