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Gene Card

Best human hits

SLC2A4RG; ZNF395; ZNF704

Unique Gene ID

Cirobu.g00004408

Gene Model ID

KH2012:KH.C2.23

Location

KhC2:3063912..3072381

Transcript Models and Sequences

  KH2012:KH.C2.23.v1.A.SL1-1

External Database Gene Card
Collections

Gateway full ORF

2 results

cien34900

Plate: VES75_O20

cien74567

Plate: VES82_K03

Gene collection 1 (N. Satoh)

2 results

cieg007e02

Plate: R1CiGC16d21

cieg091f02

Plate: R1CiGC40p09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

14 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
nuclear speck Orthology cellular component
metal ion binding Orthology molecular function
transcription regulatory region sequence-specific DNA binding Orthology molecular function

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
enhancer sequence-specific DNA binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
nuclear speck Hs cellular component
metal ion binding Hs molecular function

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 76.3 8.66e-15
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 76.3 8.66e-15
enhancer sequence-specific DNA binding Hs molecular function 93.6 1.26e-20
nucleic acid binding Hs molecular function 93.6 1.26e-20
DNA binding Hs molecular function 78.2 1.38e-15
transcription factor activity, sequence-specific DNA binding Hs molecular function 78.2 1.38e-15
nucleus Hs cellular component 93.6 1.26e-20
cytoplasm Hs cellular component 78.2 1.38e-15
cytosol Hs cellular component 76.3 8.66e-15
nuclear speck Hs cellular component 78.2 1.38e-15
metal ion binding Hs molecular function 93.6 1.26e-20

GO (InterProScan)

No result

GO Term Analysis Type e-value





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