Aniseed - Gene card

Gene Card

Best human hits

FEZF2; GFI1; GFI1B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004412

Gene Model ID

KH2012:KH.C2.233

Location

KhC2:7220795..7224474

Transcript Models and Sequences

KH2012:KH.C2.233.v1.A.SL2-1
KH2012:KH.C2.233.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000011341
NCBI Reference Sequence	XM_002127135.2

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Gfi-1b	PANTHER	Zinc finger protein Gfi-1b

GOSlim

18 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Blast	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
regulation of transcription, DNA-templated	InterProScan	biological process
nuclear body	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
metal ion binding	Blast	molecular function
transcription factor binding	Blast	molecular function
intracellular part	Blast	cellular component
macromolecular complex	Blast	cellular component
nuclear lumen	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	147	1.26e-39
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	268	3.75e-87
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	271	3.75e-87
RNA polymerase II transcription factor binding	Hs	molecular function	268	3.75e-87
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	147	1.26e-39
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	147	1.26e-39
nucleic acid binding	Hs	molecular function	271	3.75e-87
DNA binding	Hs	molecular function	271	3.75e-87
chromatin binding	Hs	molecular function	147	1.26e-39
protein binding	Hs	molecular function	271	3.75e-87
nucleus	Hs	cellular component	271	3.75e-87
transcription factor complex	Hs	cellular component	268	3.75e-87
nuclear matrix	Hs	cellular component	271	3.75e-87
nuclear body	Hs	cellular component	271	3.75e-87
transcriptional repressor complex	Hs	cellular component	271	3.75e-87
sequence-specific DNA binding	Hs	molecular function	147	1.26e-39
transcription regulatory region DNA binding	Hs	molecular function	271	3.75e-87
metal ion binding	Hs	molecular function	271	3.75e-87

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	1.3E-4
regulation of transcription, DNA-templated	PANTHER	biological process	8.6E-96