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Gene Card

Best human hits

ECH1; ECHDC2; ECHS1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004527

Gene Model ID

KH2012:KH.C2.338

Location

KhC2:5005806..5011647

Transcript Models and Sequences

  KH2012:KH.C2.338.v1.A.nonSL5-3
KH2012:KH.C2.338.v1.A.SL1-3
KH2012:KH.C2.338.v1.A.SL2-3
KH2012:KH.C2.338.v1.A.SL4-3
KH2012:KH.C2.338.v2.A.nonSL5-1
KH2012:KH.C2.338.v2.A.SL1-1
KH2012:KH.C2.338.v2.A.SL2-1
KH2012:KH.C2.338.v2.A.SL4-1
KH2012:KH.C2.338.v2.R.ND3-1
KH2012:KH.C2.338.v3.A.nonSL5-1
KH2012:KH.C2.338.v3.A.SL1-1
KH2012:KH.C2.338.v3.A.SL2-1
KH2012:KH.C2.338.v3.A.SL4-1
KH2012:KH.C2.338.v4.A.nonSL5-2
KH2012:KH.C2.338.v4.A.SL1-2
KH2012:KH.C2.338.v4.A.SL2-2
KH2012:KH.C2.338.v4.A.SL4-2

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000003611
NCBI Reference Sequence XM_002121652.4
NCBI Reference Sequence XM_009859366.2
Collections

Gateway full ORF

2 results

cima830565

Plate: VES61_E23

cien175688

Plate: VES97_C11

Gene collection 1 (N. Satoh)

1 result

cieg042o11

Plate: R1CiGC22k20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Enoyl-CoA_hydra/iso Pfam Enoyl-CoA hydratase/isomerase
ClpP/crotonase-like_dom_sf SUPERFAMILY ClpP/crotonase-like domain superfamily
Enoyl-CoA_hyd/isom_CS ProSitePatterns Enoyl-CoA hydratase/isomerase, conserved site

GOSlim

9 results

GO Term Annotation Origin Type
catalytic activity Blast molecular function
receptor binding Blast molecular function
protein binding Blast molecular function
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
peroxisome Blast cellular component
metabolic process InterProScan biological process
membrane Blast cellular component
extracellular exosome Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
catalytic activity Hs molecular function 99.0 5.52e-24
enoyl-CoA hydratase activity Hs molecular function 99.0 5.52e-24
receptor binding Hs molecular function 80.1 5.51e-17
protein binding Hs molecular function 99.0 5.52e-24
mitochondrion Hs cellular component 99.0 5.52e-24
mitochondrial matrix Hs cellular component 99.0 5.52e-24
peroxisome Hs cellular component 80.1 5.51e-17
membrane Hs cellular component 80.1 5.51e-17
lyase activity Hs molecular function 99.0 5.52e-24
isomerase activity Hs molecular function 80.1 5.51e-17
extracellular exosome Hs cellular component 99.0 5.52e-24

GO (InterProScan)

2 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 5.5E-40
metabolic process Pfam biological process 5.5E-40

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