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GENE CARD

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Gene Card

Best human hits

SLC36A1; SLC36A2; SLC36A4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004571

Gene Model ID

KH2012:KH.C2.38

Location

KhC2:4136542..4146003

Transcript Models and Sequences

  KH2012:KH.C2.38.v1.A.ND2-1
KH2012:KH.C2.38.v1.A.SL1-1
KH2012:KH.C2.38.v2.A.ND3-1
KH2012:KH.C2.38.v2.A.nonSL4-1
KH2012:KH.C2.38.v3.A.ND2-1
KH2012:KH.C2.38.v3.A.SL1-1
KH2012:KH.C2.38.v4.A.ND3-1
KH2012:KH.C2.38.v4.A.nonSL4-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000011462
Collections

Gateway full ORF

5 results

cien34648

Plate: VES75_M21

cien41445

Plate: VES76_I22

cien63365

Plate: VES80_F06

cien73249

Plate: VES81_E19

cima887230

Plate: VES70_B03

Gene collection 1 (N. Satoh)

1 result

cieg044d22

Plate: R1CiGC22l03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
AA_transpt_TM Pfam Amino acid transporter, transmembrane domain

GOSlim

14 results

GO Term Annotation Origin Type
cytoplasm Orthology cellular component
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
vacuolar membrane Orthology cellular component
endoplasmic reticulum Orthology cellular component
plasma membrane Orthology cellular component
ion transport Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
extracellular exosome Orthology cellular component
organic substance transport Orthology biological process
transmembrane transport Orthology biological process
monovalent inorganic cation transport Orthology biological process
cation transport Orthology biological process

GO (Orthology)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
amino acid transmembrane transport Hs biological process
hydrogen:amino acid symporter activity Hs molecular function
cytoplasm Hs cellular component
lysosome Hs cellular component
lysosomal membrane Hs cellular component
vacuolar membrane Hs cellular component
endoplasmic reticulum Hs cellular component
plasma membrane Hs cellular component
ion transport Hs biological process
amino acid transport Hs biological process
hydrogen ion transmembrane transporter activity Hs molecular function
amino acid transmembrane transporter activity Hs molecular function
neutral amino acid transmembrane transporter activity Hs molecular function
L-alanine transmembrane transporter activity Hs molecular function
glycine transmembrane transporter activity Hs molecular function
L-proline transmembrane transporter activity Hs molecular function
L-tryptophan transmembrane transporter activity Hs molecular function
symporter activity Hs molecular function
neutral amino acid transport Hs biological process
L-alanine transport Hs biological process
glycine transport Hs biological process
proline transport Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
proline transmembrane transport Hs biological process
extracellular exosome Hs cellular component
hydrogen ion transmembrane transport Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
hydrogen:amino acid symporter activity Hs molecular function 347 1.32e-114
cytoplasm Hs cellular component 328 2.03e-107
lysosome Hs cellular component 347 1.32e-114
lysosomal membrane Hs cellular component 347 1.32e-114
vacuolar membrane Hs cellular component 340 2.31e-111
endoplasmic reticulum Hs cellular component 347 1.32e-114
plasma membrane Hs cellular component 347 1.32e-114
hydrogen ion transmembrane transporter activity Hs molecular function 347 1.32e-114
amino acid transmembrane transporter activity Hs molecular function 347 1.32e-114
neutral amino acid transmembrane transporter activity Hs molecular function 347 1.32e-114
L-alanine transmembrane transporter activity Hs molecular function 347 1.32e-114
glycine transmembrane transporter activity Hs molecular function 347 1.32e-114
L-proline transmembrane transporter activity Hs molecular function 347 1.32e-114
L-tryptophan transmembrane transporter activity Hs molecular function 340 2.31e-111
symporter activity Hs molecular function 347 1.32e-114
membrane Hs cellular component 347 1.32e-114
integral component of membrane Hs cellular component 347 1.32e-114
extracellular exosome Hs cellular component 328 2.03e-107

GO (InterProScan)

No result

GO Term Analysis Type e-value

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