Gene Card
Best human hits
LARP4; LARP6; LARP7
Unique Gene ID
Cirobu.g00004572
Gene Model ID
KH2012:KH.C2.380
Location
KhC2:22775..26783
Transcript Models and Sequences
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000018361 |
Gateway full ORF
1 result
cien50458
Plate: VES78_N03
Gene collection 1 (N. Satoh)
2 results
citb029m23
Plate: R1CiGC31d13
citb038n12
Plate: R1CiGC32j19
Regulatory Regions
1 results
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| La_HTH | SMART | La-type HTH domain |
| La_HTH | ProSiteProfiles | La-type HTH domain |
| La_HTH | Pfam | La-type HTH domain |
| LARP6_RRM | CDD | La-related protein 6, RNA recognition motif |
| WH-like_DNA-bd_sf | Gene3D | Winged helix-like DNA-binding domain superfamily |
| WH_DNA-bd_sf | SUPERFAMILY | Winged helix DNA-binding domain superfamily |
GOSlim
14 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| membrane | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| cytoskeletal protein binding | Blast | molecular function |
| intracellular organelle part | Blast | cellular component |
| ribosome | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 99.8 | 4.14e-22 |
| RNA binding | Hs | molecular function | 99.8 | 4.14e-22 |
| protein binding | Hs | molecular function | 99.8 | 4.14e-22 |
| nucleus | Hs | cellular component | 99.8 | 4.14e-22 |
| nucleoplasm | Hs | cellular component | 50.1 | 2.91e-06 |
| cytoplasm | Hs | cellular component | 99.8 | 4.14e-22 |
| cytosol | Hs | cellular component | 55.1 | 8.60e-08 |
| polysome | Hs | cellular component | 99.8 | 4.14e-22 |
| poly(A) binding | Hs | molecular function | 55.1 | 8.60e-08 |
| cytoplasmic stress granule | Hs | cellular component | 55.1 | 8.60e-08 |
| membrane | Hs | cellular component | 55.1 | 8.60e-08 |
| myosin binding | Hs | molecular function | 99.8 | 4.14e-22 |
| cytosolic small ribosomal subunit | Hs | cellular component | 55.1 | 8.60e-08 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 99.8 | 4.14e-22 |
| RNA stem-loop binding | Hs | molecular function | 99.8 | 4.14e-22 |
| mRNA 5'-UTR binding | Hs | molecular function | 99.8 | 4.14e-22 |
| sequence-specific mRNA binding | Hs | molecular function | 99.8 | 4.14e-22 |
| GO Term | Analysis | Type | e-value |
|---|
