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GENE CARD

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Gene Card

Best human hits

RRM1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004639

Gene Model ID

KH2012:KH.C2.441

Location

KhC2:5567259..5572734

Transcript Models and Sequences

  KH2012:KH.C2.441.v1.A.SL1-1
KH2012:KH.C2.441.v2.A.nonSL3-1
KH2012:KH.C2.441.v2.A.nonSL4-1
KH2012:KH.C2.441.v2.R.ND2-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000000347
Collections

Gateway full ORF

2 results

cima826458

Plate: VES60_G24

cien164873

Plate: VES95_G19

Gene collection 1 (N. Satoh)

1 result

cieg053j17

Plate: R1CiGC24e07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
ATP-cone_dom Pfam ATP-cone domain
RNR_lg_C Pfam Ribonucleotide reductase large subunit, C-terminal
RNR_lg_C ProSitePatterns Ribonucleotide reductase large subunit, C-terminal

GOSlim

17 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
catalytic activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nuclear envelope Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
DNA replication InterProScan biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
purine nucleotide binding Blast molecular function
identical protein binding Blast molecular function
cell projection Blast cellular component
neuronal cell body Blast cellular component
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 220 2.14e-67
catalytic activity Hs molecular function 220 2.14e-67
ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor Hs molecular function 220 2.14e-67
protein binding Hs molecular function 220 2.14e-67
ATP binding Hs molecular function 220 2.14e-67
nuclear envelope Hs cellular component 220 2.14e-67
cytoplasm Hs cellular component 220 2.14e-67
cytosol Hs cellular component 220 2.14e-67
ribonucleoside-diphosphate reductase complex Hs cellular component 220 2.14e-67
membrane Hs cellular component 220 2.14e-67
integral component of membrane Hs cellular component 220 2.14e-67
oxidoreductase activity Hs molecular function 220 2.14e-67
purine nucleotide binding Hs molecular function 220 2.14e-67
identical protein binding Hs molecular function 220 2.14e-67
cell projection Hs cellular component 220 2.14e-67
neuronal cell body Hs cellular component 220 2.14e-67
extracellular exosome Hs cellular component 220 2.14e-67
disordered domain specific binding Hs molecular function 220 2.14e-67

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA replication Pfam biological process 9.4E-27
oxidation-reduction process Pfam biological process 9.4E-27

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