Gene Card
Best human hits
DDX17; DDX42; DDX5
Unique Gene ID
Cirobu.g00004672
Gene Model ID
KH2012:KH.C2.471
Location
KhC2:80477..83358
Transcript Models and Sequences
KH2012:KH.C2.471.v1.A.ND2-1
KH2012:KH.C2.471.v2.A.nonSL10-1
KH2012:KH.C2.471.v2.A.nonSL11-1
KH2012:KH.C2.471.v2.A.nonSL12-1
KH2012:KH.C2.471.v2.A.nonSL13-1
KH2012:KH.C2.471.v2.A.nonSL14-1
KH2012:KH.C2.471.v2.A.nonSL15-1
KH2012:KH.C2.471.v2.A.nonSL4-1
KH2012:KH.C2.471.v2.A.nonSL5-1
KH2012:KH.C2.471.v2.A.nonSL6-1
KH2012:KH.C2.471.v2.A.nonSL7-1
KH2012:KH.C2.471.v2.A.nonSL8-1
KH2012:KH.C2.471.v2.A.nonSL9-1
KH2012:KH.C2.471.v2.A.SL1-1
KH2012:KH.C2.471.v2.A.SL16-1
KH2012:KH.C2.471.v2.A.SL3-1
Database | Gene ID |
---|---|
ENSEMBL | ENSCING00000004147 |
NCBI Reference Sequence | XM_002130095.4 |
cien99847
Plate: VES85_N21
cima868039
Plate: VES66_O05
citb011i10
Plate: R1CiGC30c12
cilv035k21
Plate: R1CiGC27p02
n/a
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IPR Term | Analysis | Definition |
---|---|---|
RNA_helicase_DEAD_Q_motif | ProSiteProfiles | RNA helicase, DEAD-box type, Q motif |
Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
Helicase_C | Pfam | Helicase, C-terminal |
Helicase_C | CDD | Helicase, C-terminal |
P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
Helicase_C | ProSiteProfiles | Helicase, C-terminal |
RNA-helicase_DEAD-box_CS | ProSitePatterns | ATP-dependent RNA helicase DEAD-box, conserved site |
Helicase_C | SMART | Helicase, C-terminal |
Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
GO Term | Annotation Origin | Type |
---|---|---|
negative regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
nucleotide binding | Orthology | molecular function |
mRNA splicing, via spliceosome | Orthology | biological process |
nuclear-transcribed mRNA catabolic process | Orthology | biological process |
immune system process | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
transcription coactivator activity | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
calmodulin binding | Orthology | molecular function |
ATP binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Orthology | cellular component |
cytosol | Orthology | cellular component |
transcription, DNA-templated | Orthology | biological process |
regulation of transcription, DNA-templated | Orthology | biological process |
regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
RNA processing | Orthology | biological process |
mRNA processing | Orthology | biological process |
RNA splicing | Orthology | biological process |
membrane | Orthology | cellular component |
nuclear speck | Orthology | cellular component |
hydrolase activity | Orthology | molecular function |
enzyme binding | Orthology | molecular function |
positive regulation of transcription from RNA polymerase II promoter | Orthology | biological process |
extracellular exosome | Orthology | cellular component |
regulation of gene expression | Orthology | biological process |
animal organ development | Orthology | biological process |
cell differentiation | Orthology | biological process |
nucleoside-triphosphatase activity | Orthology | molecular function |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
mRNA metabolic process | Orthology | biological process |
RNA metabolic process | Orthology | biological process |
cellular process | Orthology | biological process |
cell surface receptor signaling pathway | Orthology | biological process |
cellular response to organic substance | Orthology | biological process |
signal transduction | Orthology | biological process |
response to lipid | Orthology | biological process |
negative regulation of gene expression | Orthology | biological process |
macromolecular complex binding | Orthology | molecular function |
anatomical structure development | Orthology | biological process |
receptor binding | Orthology | molecular function |
transcription factor binding | Orthology | molecular function |
defense response | Orthology | biological process |
regulation of signal transduction | Orthology | biological process |
intracellular | Orthology | cellular component |
intracellular signal transduction | Orthology | biological process |
apoptotic process | Orthology | biological process |
chromatin binding | Orthology | molecular function |
nuclear body | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleotide binding | Hs | molecular function | 669 | 0.0 |
nucleic acid binding | Hs | molecular function | 669 | 0.0 |
transcription coactivator activity | Hs | molecular function | 667 | 0.0 |
RNA binding | Hs | molecular function | 669 | 0.0 |
RNA helicase activity | Hs | molecular function | 669 | 0.0 |
mRNA 3'-UTR binding | Hs | molecular function | 669 | 0.0 |
ATP-dependent RNA helicase activity | Hs | molecular function | 669 | 0.0 |
helicase activity | Hs | molecular function | 669 | 0.0 |
protein binding | Hs | molecular function | 669 | 0.0 |
calmodulin binding | Hs | molecular function | 669 | 0.0 |
ATP binding | Hs | molecular function | 669 | 0.0 |
nucleus | Hs | cellular component | 669 | 0.0 |
nucleoplasm | Hs | cellular component | 669 | 0.0 |
spliceosomal complex | Hs | cellular component | 669 | 0.0 |
nucleolus | Hs | cellular component | 669 | 0.0 |
cytoplasm | Hs | cellular component | 669 | 0.0 |
cytosol | Hs | cellular component | 667 | 0.0 |
RNA-dependent ATPase activity | Hs | molecular function | 667 | 0.0 |
Cajal body | Hs | cellular component | 358 | 4.34e-113 |
membrane | Hs | cellular component | 669 | 0.0 |
nuclear speck | Hs | cellular component | 667 | 0.0 |
hydrolase activity | Hs | molecular function | 669 | 0.0 |
enzyme binding | Hs | molecular function | 669 | 0.0 |
intracellular ribonucleoprotein complex | Hs | cellular component | 669 | 0.0 |
MH2 domain binding | Hs | molecular function | 669 | 0.0 |
pre-mRNA binding | Hs | molecular function | 669 | 0.0 |
ribonucleoprotein complex binding | Hs | molecular function | 669 | 0.0 |
SMAD binding | Hs | molecular function | 669 | 0.0 |
calcium-dependent protein binding | Hs | molecular function | 669 | 0.0 |
androgen receptor binding | Hs | molecular function | 669 | 0.0 |
extracellular exosome | Hs | cellular component | 669 | 0.0 |
R-SMAD binding | Hs | molecular function | 669 | 0.0 |
primary miRNA binding | Hs | molecular function | 669 | 0.0 |
catalytic step 2 spliceosome | Hs | cellular component | 669 | 0.0 |
SMAD protein complex | Hs | cellular component | 669 | 0.0 |
promoter-specific chromatin binding | Hs | molecular function | 669 | 0.0 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | Pfam | molecular function | 6.1E-48 |
ATP binding | Pfam | molecular function | 6.1E-48 |