Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000008670
NCBI Reference Sequence	NM_001032573.1

Collections

Gene collection 1 (N. Satoh)

1 result

cilv008p18

Plate: R1CiGC25p17

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

1 results

Ci-vGAT -2668/-1 REG00000032 [ regulatory_region (extended_promoter) ]
- Cirobu.REG00001168.KH2012.C2.4284388-4285777 REG00001168 [ regulatory_region (extended_promoter) ]
  - Cirobu.REG00001169.KH2012.C2.4284888-4285777 REG00001169 [ regulatory_region (RNApol_II_core_promoter) ]
  - Cirobu.REG00001171.KH2012.C2.4284511-4284711 REG00001171 [ regulatory_region (enhancer) ]
- Cirobu.REG00001170.KH2012.C2.4283110-4284511;4284711-4285777 REG00001170 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
AA_transpt_TM	Pfam	Amino acid transporter, transmembrane domain

GOSlim

30 results

GO Term	Annotation Origin	Type
cytoplasm	Blast	cellular component
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
vacuolar membrane	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
plasma membrane	Orthology	cellular component
ion transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
neuron projection	Orthology	cellular component
intracellular organelle	Orthology	cellular component
synapse	Orthology	cellular component
extracellular exosome	Blast	cellular component
organic substance transport	Orthology	biological process
transmembrane transport	Orthology	biological process
chemical synaptic transmission	Orthology	biological process
synapse part	Orthology	cellular component
neuron part	Orthology	cellular component
developmental process	Orthology	biological process
endomembrane system	Orthology	cellular component
cation transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
organelle membrane	Orthology	cellular component
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
cell part	Orthology	cellular component

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
amino acid transmembrane transport	Hs	biological process
plasma membrane	Hs	cellular component
ion transport	Hs	biological process
neurotransmitter transport	Hs	biological process
neurotransmitter secretion	Hs	biological process
aging	Hs	biological process
synaptic vesicle	Hs	cellular component
amino acid transmembrane transporter activity	Hs	molecular function
glycine transmembrane transporter activity	Hs	molecular function
gamma-aminobutyric acid:proton symporter activity	Hs	molecular function
gamma-aminobutyric acid transport	Hs	biological process
glycine transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
integral component of synaptic vesicle membrane	Hs	cellular component
dendrite	Hs	cellular component
cytoplasmic vesicle membrane	Hs	cellular component
synaptic vesicle membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
neuron projection	Hs	cellular component
intracellular organelle	Hs	cellular component
dendrite terminus	Hs	cellular component
neuron projection terminus	Hs	cellular component
cone cell pedicle	Hs	cellular component
synapse	Hs	cellular component
presynaptic active zone	Hs	cellular component
cell tip	Hs	cellular component
inhibitory synapse	Hs	cellular component
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane	Hs	cellular component

GO (Blast)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
hydrogen:amino acid symporter activity	Hs	molecular function	63.5	1.88e-10
cytoplasm	Hs	cellular component	63.5	1.88e-10
lysosome	Hs	cellular component	55.1	7.55e-08
lysosomal membrane	Hs	cellular component	55.1	7.55e-08
vacuolar membrane	Hs	cellular component	63.5	1.88e-10
endoplasmic reticulum	Hs	cellular component	55.1	7.55e-08
plasma membrane	Hs	cellular component	395	2.58e-131
synaptic vesicle	Hs	cellular component	395	2.58e-131
hydrogen ion transmembrane transporter activity	Hs	molecular function	63.5	1.88e-10
amino acid transmembrane transporter activity	Hs	molecular function	395	2.58e-131
neutral amino acid transmembrane transporter activity	Hs	molecular function	55.1	7.55e-08
L-alanine transmembrane transporter activity	Hs	molecular function	63.5	1.88e-10
glycine transmembrane transporter activity	Hs	molecular function	395	2.58e-131
L-proline transmembrane transporter activity	Hs	molecular function	63.5	1.88e-10
symporter activity	Hs	molecular function	55.1	7.55e-08
gamma-aminobutyric acid:proton symporter activity	Hs	molecular function	395	2.58e-131
membrane	Hs	cellular component	395	2.58e-131
integral component of membrane	Hs	cellular component	395	2.58e-131
integral component of synaptic vesicle membrane	Hs	cellular component	395	2.58e-131
dendrite	Hs	cellular component	395	2.58e-131
cytoplasmic vesicle membrane	Hs	cellular component	395	2.58e-131
synaptic vesicle membrane	Hs	cellular component	395	2.58e-131
cytoplasmic vesicle	Hs	cellular component	395	2.58e-131
neuron projection	Hs	cellular component	395	2.58e-131
intracellular organelle	Hs	cellular component	395	2.58e-131
dendrite terminus	Hs	cellular component	395	2.58e-131
neuron projection terminus	Hs	cellular component	395	2.58e-131
cone cell pedicle	Hs	cellular component	395	2.58e-131
synapse	Hs	cellular component	395	2.58e-131
presynaptic active zone	Hs	cellular component	395	2.58e-131
cell tip	Hs	cellular component	395	2.58e-131
inhibitory synapse	Hs	cellular component	395	2.58e-131
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane	Hs	cellular component	395	2.58e-131
extracellular exosome	Hs	cellular component	63.5	1.88e-10

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences