Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000008651

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg048n10

Plate: R1CiGC23k20

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
HhH2	SMART	Helix-hairpin-helix motif, class 2
XPG-I_dom	Pfam	XPG-I domain
XPG/Rad2	PRINTS	XPG/Rad2 endonuclease
XPG_DNA_repair_N	Pfam	XPG N-terminal
PIN-like_dom_sf	SUPERFAMILY	PIN-like domain superfamily
5-3_exonuclease_C_sf	SUPERFAMILY	5'-3' exonuclease, C-terminal domain superfamily
XPG-I_dom	SMART	XPG-I domain
XPG_DNA_repair_N	SMART	XPG N-terminal
XPG/Rad2	PANTHER	XPG/Rad2 endonuclease

GOSlim

24 results

GO Term	Annotation Origin	Type
magnesium ion binding	Blast	molecular function
DNA binding	Orthology	molecular function
double-stranded DNA binding	Blast	molecular function
catalytic activity	Orthology	molecular function
protein binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Blast	cellular component
mitochondrion	Blast	cellular component
centrosome	Orthology	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
membrane	Blast	cellular component
hydrolase activity	Orthology	molecular function
macromolecular complex	Blast	cellular component
metal ion binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
DNA metabolic process	Orthology	biological process
organelle organization	Orthology	biological process
microtubule-based process	Orthology	biological process
mitotic cell cycle phase transition	Orthology	biological process
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
RNA metabolic process	Blast	biological process

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
double-strand break repair via homologous recombination	Hs	biological process
DNA binding	Hs	molecular function
catalytic activity	Hs	molecular function
nuclease activity	Hs	molecular function
endonuclease activity	Hs	molecular function
endodeoxyribonuclease activity	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
centrosome	Hs	cellular component
DNA repair	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
crossover junction endodeoxyribonuclease activity	Hs	molecular function
regulation of centrosome duplication	Hs	biological process
hydrolase activity	Hs	molecular function
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component
positive regulation of mitotic cell cycle spindle assembly checkpoint	Hs	biological process
nucleic acid phosphodiester bond hydrolysis	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
magnesium ion binding	Hs	molecular function	103	1.49e-23
nuclear chromosome, telomeric region	Hs	cellular component	103	1.49e-23
DNA binding	Hs	molecular function	354	4.43e-110
damaged DNA binding	Hs	molecular function	103	1.49e-23
double-stranded DNA binding	Hs	molecular function	103	1.49e-23
single-stranded DNA binding	Hs	molecular function	99.8	2.07e-21
catalytic activity	Hs	molecular function	354	4.43e-110
nuclease activity	Hs	molecular function	354	4.43e-110
endonuclease activity	Hs	molecular function	354	4.43e-110
endodeoxyribonuclease activity	Hs	molecular function	354	4.43e-110
RNA-DNA hybrid ribonuclease activity	Hs	molecular function	103	1.49e-23
exonuclease activity	Hs	molecular function	103	1.49e-23
protein binding	Hs	molecular function	103	1.49e-23
nucleus	Hs	cellular component	354	4.43e-110
nucleoplasm	Hs	cellular component	354	4.43e-110
nucleolus	Hs	cellular component	103	1.49e-23
mitochondrion	Hs	cellular component	103	1.49e-23
centrosome	Hs	cellular component	354	4.43e-110
double-stranded DNA exodeoxyribonuclease activity	Hs	molecular function	103	1.49e-23
5'-3' exonuclease activity	Hs	molecular function	103	1.49e-23
crossover junction endodeoxyribonuclease activity	Hs	molecular function	354	4.43e-110
membrane	Hs	cellular component	103	1.49e-23
hydrolase activity	Hs	molecular function	354	4.43e-110
hydrolase activity, acting on ester bonds	Hs	molecular function	103	1.49e-23
5'-flap endonuclease activity	Hs	molecular function	103	1.49e-23
macromolecular complex	Hs	cellular component	103	1.49e-23
metal ion binding	Hs	molecular function	354	4.43e-110
flap endonuclease activity	Hs	molecular function	103	1.49e-23
extracellular exosome	Hs	cellular component	354	4.43e-110

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	0.0012
catalytic activity	SMART	molecular function	0.0012
nuclease activity	PANTHER	molecular function	1.7E-166
DNA repair	PANTHER	biological process	1.7E-166

Gene Card

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