Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

ciad012l15

Plate: R1CiGC02c22

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
TIF2_asu_C	SUPERFAMILY	Translation initiation factor 2, alpha subunit, C-terminal
TIF_2_asu	Pfam	Translation initiation factor 2, alpha subunit
S1_domain	ProSiteProfiles	S1 domain
S1_domain	Pfam	S1 domain
TIF2_asu_middle_sf	SUPERFAMILY	Translation initiation factor 2, alpha subunit, middle domain superfamily
TIF2_asu_middle_sf	Gene3D	Translation initiation factor 2, alpha subunit, middle domain superfamily
TIF_2_asu	PANTHER	Translation initiation factor 2, alpha subunit
TIF2_asu_C	Gene3D	Translation initiation factor 2, alpha subunit, C-terminal
S1_dom	SMART	RNA-binding domain, S1
NA-bd_OB-fold	SUPERFAMILY	Nucleic acid-binding, OB-fold

GOSlim

26 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
ribosome	Orthology	cellular component
translational initiation	Orthology	biological process
membrane	Orthology	cellular component
protein autophosphorylation	Orthology	biological process
transmembrane transport	Orthology	biological process
extracellular exosome	Orthology	cellular component
regulation of gene expression	Orthology	biological process
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
developmental process	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
cell communication	Orthology	biological process
cellular response to stress	Orthology	biological process
signal transduction	Orthology	biological process
cellular response to organic substance	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
cell projection	Orthology	cellular component
plasma membrane region	Orthology	cellular component
positive regulation of cell death	Orthology	biological process

GO (Orthology)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
translation initiation factor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
ribosome	Hs	cellular component
polysome	Hs	cellular component
eukaryotic translation initiation factor 2 complex	Hs	cellular component
eukaryotic translation initiation factor 2B complex	Hs	cellular component
translation	Hs	biological process
translational initiation	Hs	biological process
regulation of translation	Hs	biological process
aging	Hs	biological process
cytoplasmic stress granule	Hs	cellular component
membrane	Hs	cellular component
eukaryotic 48S preinitiation complex	Hs	cellular component
cellular response to amino acid starvation	Hs	biological process
cellular response to heat	Hs	biological process
cellular response to UV	Hs	biological process
response to endoplasmic reticulum stress	Hs	biological process
PERK-mediated unfolded protein response	Hs	biological process
ribosome binding	Hs	molecular function
multi-eIF complex	Hs	cellular component
translation initiation ternary complex	Hs	cellular component
protein autophosphorylation	Hs	biological process
transmembrane transport	Hs	biological process
extracellular exosome	Hs	cellular component
glial limiting end-foot	Hs	cellular component
positive regulation of neuron death	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	421	5.10e-149
RNA binding	Hs	molecular function	421	5.10e-149
translation initiation factor activity	Hs	molecular function	421	5.10e-149
protein binding	Hs	molecular function	421	5.10e-149
nucleus	Hs	cellular component	421	5.10e-149
cytoplasm	Hs	cellular component	421	5.10e-149
cytosol	Hs	cellular component	421	5.10e-149
ribosome	Hs	cellular component	421	5.10e-149
polysome	Hs	cellular component	421	5.10e-149
eukaryotic translation initiation factor 2 complex	Hs	cellular component	421	5.10e-149
eukaryotic translation initiation factor 2B complex	Hs	cellular component	421	5.10e-149
cytoplasmic stress granule	Hs	cellular component	421	5.10e-149
membrane	Hs	cellular component	421	5.10e-149
eukaryotic 48S preinitiation complex	Hs	cellular component	421	5.10e-149
ribosome binding	Hs	molecular function	421	5.10e-149
multi-eIF complex	Hs	cellular component	421	5.10e-149
translation initiation ternary complex	Hs	cellular component	421	5.10e-149
extracellular exosome	Hs	cellular component	421	5.10e-149
glial limiting end-foot	Hs	cellular component	421	5.10e-149

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	3.7E-16
RNA binding	PANTHER	molecular function	4.2E-131
translation initiation factor activity	PANTHER	molecular function	4.2E-131

Gene Card

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