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Gene Card

Best human hits

LRRC74A; LRRC74B; NLRC3

Unique Gene ID

Cirobu.g00004869

Gene Model ID

KH2012:KH.C2.65

Location

KhC2:2619209..2624415

External Database Gene Card

External database links

2 results

Collections

Gene collection 1 (N. Satoh)

2 results

ciad013k19

Plate: R1CiGC02k16

ciad031n12

Plate: R1CiGC03b08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt Pfam Leucine-rich repeat
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom CDD EF-hand domain
EF_hand_dom ProSiteProfiles EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF_hand_dom SMART EF-hand domain

GOSlim

8 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Orthology molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
perinuclear region of cytoplasm Blast cellular component
calcium ion binding InterProScan molecular function

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 125 1.81e-29
protein binding Hs molecular function 308 1.44e-97
ATP binding Hs molecular function 125 1.81e-29
cytoplasm Hs cellular component 125 1.81e-29
microtubule organizing center Hs cellular component 125 1.81e-29
cytosol Hs cellular component 125 1.81e-29
phosphatidylinositol 3-kinase regulatory subunit binding Hs molecular function 125 1.81e-29
perinuclear region of cytoplasm Hs cellular component 125 1.81e-29

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 2.1E-5
calcium ion binding CDD molecular function 7.88695E-9





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