Aniseed - Gene card

Gene Card

Best human hits

BMP1; CUBN; TLL2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004927

Gene Model ID

KH2012:KH.C2.703

Location

KhC2:4404841..4411327

Transcript Models and Sequences

KH2012:KH.C2.703.v1.A.ND1-1
KH2012:KH.C2.703.v1.A.nonSL3-1
KH2012:KH.C2.703.v1.A.nonSL4-1
KH2012:KH.C2.703.v1.A.SL2-1
KH2012:KH.C2.703.v1.A.SL5-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004419
NCBI Reference Sequence	XM_002128704.3

Collections

Gene collection 1 (N. Satoh)

1 result

ciad026a24

Plate: R1CiGC03g06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Sperma_CUB_dom_sf	Gene3D	Spermadhesin, CUB domain superfamily
CUB_dom	CDD	CUB domain
CUB_dom	ProSiteProfiles	CUB domain
Sperma_CUB_dom_sf	SUPERFAMILY	Spermadhesin, CUB domain superfamily
CUB_dom	SMART	CUB domain
CUB_dom	Pfam	CUB domain

GOSlim

46 results

GO Term	Annotation Origin	Type
metalloendopeptidase activity	Blast	molecular function
serine-type endopeptidase activity	Blast	molecular function
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
cytoplasm	Blast	cellular component
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
endosome	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
brush border	Blast	cellular component
peptidase activity	Blast	molecular function
metallopeptidase activity	Blast	molecular function
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
brush border membrane	Blast	cellular component
vesicle	Blast	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
apical part of cell	Blast	cellular component
metal ion binding	Blast	molecular function
extracellular exosome	Blast	cellular component
receptor binding	Blast	molecular function
molecular function regulator	Blast	molecular function
regulation of signal transduction	Blast	biological process
signaling receptor activity	Blast	molecular function
membrane part	Blast	cellular component
endomembrane system	Blast	cellular component
binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
plasma membrane part	Blast	cellular component
cell surface	Blast	cellular component
small molecule binding	Blast	molecular function
tetrapyrrole binding	Blast	molecular function
cofactor binding	Blast	molecular function
vacuolar part	Blast	cellular component
intracellular organelle lumen	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

40 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
metalloendopeptidase activity	Hs	molecular function	209	1.88e-57
serine-type endopeptidase activity	Hs	molecular function	209	1.88e-57
receptor activity	Hs	molecular function	221	2.87e-61
cytokine activity	Hs	molecular function	208	2.44e-57
transporter activity	Hs	molecular function	221	2.87e-61
calcium ion binding	Hs	molecular function	221	2.87e-61
protein binding	Hs	molecular function	221	2.87e-61
extracellular region	Hs	cellular component	209	1.88e-57
proteinaceous extracellular matrix	Hs	cellular component	208	2.44e-57
extracellular space	Hs	cellular component	208	2.44e-57
cytoplasm	Hs	cellular component	221	2.87e-61
lysosome	Hs	cellular component	221	2.87e-61
lysosomal membrane	Hs	cellular component	221	2.87e-61
endosome	Hs	cellular component	221	2.87e-61
endoplasmic reticulum	Hs	cellular component	221	2.87e-61
Golgi apparatus	Hs	cellular component	221	2.87e-61
cytosol	Hs	cellular component	221	2.87e-61
plasma membrane	Hs	cellular component	221	2.87e-61
brush border	Hs	cellular component	221	2.87e-61
clathrin-coated pit	Hs	cellular component	221	2.87e-61
growth factor activity	Hs	molecular function	208	2.44e-57
drug binding	Hs	molecular function	221	2.87e-61
peptidase activity	Hs	molecular function	209	1.88e-57
metallopeptidase activity	Hs	molecular function	209	1.88e-57
zinc ion binding	Hs	molecular function	209	1.88e-57
endosome membrane	Hs	cellular component	221	2.87e-61
membrane	Hs	cellular component	221	2.87e-61
apical plasma membrane	Hs	cellular component	221	2.87e-61
hydrolase activity	Hs	molecular function	209	1.88e-57
endocytic vesicle	Hs	cellular component	221	2.87e-61
extrinsic component of external side of plasma membrane	Hs	cellular component	221	2.87e-61
cobalamin binding	Hs	molecular function	221	2.87e-61
brush border membrane	Hs	cellular component	221	2.87e-61
vesicle	Hs	cellular component	208	2.44e-57
identical protein binding	Hs	molecular function	208	2.44e-57
protein homodimerization activity	Hs	molecular function	221	2.87e-61
lysosomal lumen	Hs	cellular component	221	2.87e-61
apical part of cell	Hs	cellular component	221	2.87e-61
metal ion binding	Hs	molecular function	221	2.87e-61
extracellular exosome	Hs	cellular component	221	2.87e-61

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value