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Gene Card

Best human hits

CORO7-PAM16; PAM16

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004940

Gene Model ID

KH2012:KH.C2.716

Location

KhC2:2271305..2273265

Transcript Models and Sequences

  KH2012:KH.C2.716.v1.A.nonSL3-1
KH2012:KH.C2.716.v1.A.nonSL4-1
KH2012:KH.C2.716.v1.A.nonSL5-1
KH2012:KH.C2.716.v1.R.ND1-1
KH2012:KH.C2.716.v2.A.ND2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000020615
NCBI Reference Sequence XM_002127110.4
Collections

Gateway full ORF

2 results

cima878152

Plate: VES68_O07

cima880670

Plate: VES68_C20

Gene collection 1 (N. Satoh)

1 result

cieg014h23

Plate: R1CiGC17h17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
J_dom_sf Gene3D Chaperone J-domain superfamily
Tim16 PANTHER Mitochondrial import inner membrane translocase subunit Tim16

GOSlim

14 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
mitochondrion Orthology cellular component
mitochondrial inner membrane Orthology cellular component
mitochondrial matrix Orthology cellular component
Golgi apparatus Blast cellular component
protein transport Orthology biological process
membrane Orthology cellular component
macromolecular complex Orthology cellular component
membrane part Orthology cellular component
organelle organization Orthology biological process
transmembrane transport Orthology biological process
protein targeting Orthology biological process
establishment of protein localization to organelle Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
presequence translocase-associated import motor Hs cellular component
ossification Hs biological process
protein binding Hs molecular function
mitochondrion Hs cellular component
mitochondrial inner membrane Hs cellular component
mitochondrial inner membrane presequence translocase complex Hs cellular component
mitochondrial matrix Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
protein import into mitochondrial matrix Hs biological process
extrinsic component of mitochondrial inner membrane Hs cellular component
negative regulation of ATPase activity Hs biological process
macromolecular complex Hs cellular component

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
presequence translocase-associated import motor Hs cellular component 121 1.74e-36
protein binding Hs molecular function 124 7.42e-34
mitochondrion Hs cellular component 121 1.74e-36
mitochondrial inner membrane Hs cellular component 121 1.74e-36
mitochondrial inner membrane presequence translocase complex Hs cellular component 121 1.74e-36
mitochondrial matrix Hs cellular component 121 1.74e-36
Golgi apparatus Hs cellular component 124 7.42e-34
membrane Hs cellular component 121 1.74e-36
extrinsic component of mitochondrial inner membrane Hs cellular component 121 1.74e-36
macromolecular complex Hs cellular component 121 1.74e-36

GO (InterProScan)

2 results

GO Term Analysis Type e-value
mitochondrial inner membrane presequence translocase complex PANTHER cellular component 2.3E-35
protein import into mitochondrial matrix PANTHER biological process 2.3E-35

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