Aniseed - Gene card

Gene Card

Best human hits

EFHC1; EFHC2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004999

Gene Model ID

KH2012:KH.C2.771

Location

KhC2:7027853..7033136

Transcript Models and Sequences

KH2012:KH.C2.771.v1.B.ND1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000006762

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cits033h18

Plate: R1CiGC34o07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Uncharacterised_DM10	SMART	Uncharacterised domain DM10
Uncharacterised_DM10	ProSiteProfiles	Uncharacterised domain DM10
DUF1126	Pfam	Domain of unknown function DUF1126

GOSlim

19 results

GO Term	Annotation Origin	Type
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytoskeleton	Orthology	cellular component
protein C-terminus binding	Orthology	molecular function
neuronal cell body	Orthology	cellular component
membrane organization	Orthology	biological process
cell division	Orthology	biological process
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
cell projection part	Orthology	cellular component
microtubule	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
plasma membrane region	Orthology	cellular component
microtubule-based process	Orthology	biological process
tubulin binding	Orthology	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
mitotic cytokinesis	Hs	biological process
spindle pole	Hs	cellular component
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
spindle	Hs	cellular component
cytoskeleton	Hs	cellular component
axoneme	Hs	cellular component
mitotic spindle organization	Hs	biological process
protein C-terminus binding	Hs	molecular function
alpha-tubulin binding	Hs	molecular function
neuronal cell body	Hs	cellular component
regulation of cell division	Hs	biological process
mitotic spindle	Hs	cellular component

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
spindle pole	Hs	cellular component	634
calcium ion binding	Hs	molecular function	634
protein binding	Hs	molecular function	634
cytoplasm	Hs	cellular component	634
centrosome	Hs	cellular component	634
microtubule organizing center	Hs	cellular component	634
spindle	Hs	cellular component	634
cytoskeleton	Hs	cellular component	634
axoneme	Hs	cellular component	634
protein C-terminus binding	Hs	molecular function	634
alpha-tubulin binding	Hs	molecular function	634
neuronal cell body	Hs	cellular component	634
mitotic spindle	Hs	cellular component	634

GO (InterProScan)