Aniseed - Gene card

Gene Card

Best human hits

ARHGAP22; PLEKHB1; PLEKHB2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005045

Gene Model ID

KH2012:KH.C2.812

Location

KhC2:3725335..3728121

Transcript Models and Sequences

KH2012:KH.C2.812.v1.A.nonSL3-1
KH2012:KH.C2.812.v1.A.SL4-1
KH2012:KH.C2.812.v1.R.ND1-1
KH2012:KH.C2.812.v2.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008568
NCBI Reference Sequence	XM_002121720.3
NCBI Reference Sequence	XM_009859332.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg005f13

Plate: R1CiGC16a02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
PH_domain	ProSiteProfiles	Pleckstrin homology domain
PH_domain	Pfam	Pleckstrin homology domain
PH_domain	SMART	Pleckstrin homology domain
PH-like_dom_sf	Gene3D	PH-like domain superfamily

GOSlim

17 results

GO Term	Annotation Origin	Type
signal transducer activity	Orthology	molecular function
GTPase activator activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
endosome	Orthology	cellular component
cytosol	Blast	cellular component
focal adhesion	Blast	cellular component
signal transduction	Orthology	biological process
multicellular organism development	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cell differentiation	Orthology	biological process
anion binding	Orthology	molecular function
intracellular organelle part	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
signal transducer activity	Hs	molecular function
protein binding	Hs	molecular function
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
multicellular organism development	Hs	biological process
phototransduction	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
regulation of cell differentiation	Hs	biological process
recycling endosome membrane	Hs	cellular component

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
signal transducer activity	Hs	molecular function	85.1	3.59e-20
GTPase activator activity	Hs	molecular function	50.4	2.03e-07
protein binding	Hs	molecular function	104	3.59e-27
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function	104	3.59e-27
nucleus	Hs	cellular component	50.4	2.03e-07
cytoplasm	Hs	cellular component	85.1	3.59e-20
endosome	Hs	cellular component	104	3.59e-27
cytosol	Hs	cellular component	50.4	2.03e-07
focal adhesion	Hs	cellular component	50.4	2.03e-07
membrane	Hs	cellular component	104	3.59e-27
integral component of membrane	Hs	cellular component	104	3.59e-27
recycling endosome membrane	Hs	cellular component	104	3.59e-27

GO (InterProScan)