Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000009522

Collections

Gene collection 1 (N. Satoh)

1 result

cilv003p23

Plate: R1CiGC25k21

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

6 results

Ci-talin -2911/107 REG00000845 [ regulatory_region (extended_promoter) ]
- Ci-talin -2448/107 REG00000846 [ regulatory_region (extended_promoter) ]
  - Ci-talin -2163/107 REG00000847 [ regulatory_region (extended_promoter) ]
    - Ci-talin -1967/107 REG00000848 [ regulatory_region (extended_promoter) ]
      - Ci-talin -1411/107 REG00000849 [ regulatory_region (extended_promoter) ]
        
        Ci-talin -908/107 REG00000850 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

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Gene Annotations

InterPro

19 results

IPR Term	Analysis	Definition
Alpha-catenin/vinculin-like_sf	SUPERFAMILY	Alpha-catenin/vinculin-like superfamily
PH-like_dom_sf	Gene3D	PH-like domain superfamily
I/LWEQ_dom_sf	SUPERFAMILY	I/LWEQ domain superfamily
FERM_central	Pfam	FERM central domain
FERM_N	Pfam	FERM, N-terminal
FERM/acyl-CoA-bd_prot_sf	Gene3D	FERM/acyl-CoA-binding protein superfamily
Talin_cent	Pfam	Talin, central
FERM_central	CDD	FERM central domain
FERM_domain	ProSiteProfiles	FERM domain
ILWEQ_dom	Pfam	I/LWEQ domain
FERM_2	SUPERFAMILY	FERM superfamily, second domain
FERM_f0	Pfam	Talin, N-terminal F0 domain
ILWEQ_dom	ProDom	I/LWEQ domain
Talin1/2-RS	CDD	Talin-1/2, rod-segment
ILWEQ_dom	SMART	I/LWEQ domain
Band_41_domain	SMART	Band 4.1 domain
Talin_cent_sf	SUPERFAMILY	Talin, central domain superfamily
Vinculin-bd_dom	Pfam	Vinculin-binding site-containing domain
ILWEQ_dom	ProSiteProfiles	I/LWEQ domain

GOSlim

51 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
integrin binding	Orthology	molecular function
structural molecule activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
cell adhesion	Orthology	biological process
cell surface	Orthology	cellular component
endomembrane system	Blast	cellular component
membrane	Orthology	cellular component
cell junction	Orthology	cellular component
cytoplasmic vesicle	Blast	cellular component
protein homodimerization activity	Blast	molecular function
cell projection	Orthology	cellular component
intracellular membrane-bounded organelle	Blast	cellular component
synapse	Orthology	cellular component
protein heterodimerization activity	Blast	molecular function
actin filament binding	Orthology	molecular function
membrane organization	Orthology	biological process
extracellular exosome	Orthology	cellular component
postsynapse	Blast	cellular component
plasma membrane region	Orthology	cellular component
cell leading edge	Orthology	cellular component
anion binding	Orthology	molecular function
organelle organization	Orthology	biological process
cell	Orthology	cellular component
cellular protein localization	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
cytoskeletal protein binding	Orthology	molecular function
cell projection membrane	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
blood coagulation	Orthology	biological process
cellular process	Orthology	biological process
receptor binding	Blast	molecular function
whole membrane	Blast	cellular component
plasma membrane part	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
macromolecular complex	Blast	cellular component
intracellular organelle part	Blast	cellular component
intracellular part	Blast	cellular component
macromolecular complex binding	Blast	molecular function
synapse part	Blast	cellular component
neuron part	Blast	cellular component
synaptic membrane	Blast	cellular component
postsynaptic membrane	Blast	cellular component

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ruffle	Hs	cellular component
phosphatidylserine binding	Hs	molecular function
platelet degranulation	Hs	biological process
actin binding	Hs	molecular function
integrin binding	Hs	molecular function
structural molecule activity	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
muscle contraction	Hs	biological process
cytoskeletal anchoring at plasma membrane	Hs	biological process
cell-cell junction assembly	Hs	biological process
cell-substrate junction assembly	Hs	biological process
cell adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
cell surface	Hs	cellular component
actin cytoskeleton	Hs	cellular component
membrane	Hs	cellular component
viral process	Hs	biological process
vinculin binding	Hs	molecular function
cell junction	Hs	cellular component
LIM domain binding	Hs	molecular function
cortical actin cytoskeleton organization	Hs	biological process
ruffle membrane	Hs	cellular component
phosphatidylinositol binding	Hs	molecular function
cell projection	Hs	cellular component
synapse	Hs	cellular component
cadherin binding	Hs	molecular function
actin filament binding	Hs	molecular function
extracellular exosome	Hs	cellular component
platelet aggregation	Hs	biological process

GO (Blast)

51 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ruffle	Hs	cellular component	2848	0.0
phosphatidylserine binding	Hs	molecular function	2818	0.0
actin binding	Hs	molecular function	2848	0.0
epidermal growth factor receptor binding	Hs	molecular function	102	1.64e-21
integrin binding	Hs	molecular function	2818	0.0
structural molecule activity	Hs	molecular function	2848	0.0
structural constituent of cytoskeleton	Hs	molecular function	2848	0.0
protein binding	Hs	molecular function	2848	0.0
phospholipid binding	Hs	molecular function	102	1.64e-21
extracellular region	Hs	cellular component	2818	0.0
nucleus	Hs	cellular component	102	1.64e-21
cytoplasm	Hs	cellular component	2848	0.0
Golgi apparatus	Hs	cellular component	102	1.64e-21
cytosol	Hs	cellular component	2818	0.0
cytoskeleton	Hs	cellular component	2848	0.0
plasma membrane	Hs	cellular component	2848	0.0
focal adhesion	Hs	cellular component	2848	0.0
cell surface	Hs	cellular component	2818	0.0
endomembrane system	Hs	cellular component	102	1.64e-21
actin cytoskeleton	Hs	cellular component	2848	0.0
membrane	Hs	cellular component	2848	0.0
vinculin binding	Hs	molecular function	2818	0.0
cell junction	Hs	cellular component	2848	0.0
AP-2 adaptor complex	Hs	cellular component	102	1.64e-21
clathrin-coated vesicle	Hs	cellular component	102	1.64e-21
LIM domain binding	Hs	molecular function	2818	0.0
clathrin binding	Hs	molecular function	102	1.64e-21
clathrin-coated vesicle membrane	Hs	cellular component	102	1.64e-21
extrinsic component of cytoplasmic side of plasma membrane	Hs	cellular component	102	1.64e-21
cytoplasmic vesicle	Hs	cellular component	102	1.64e-21
clathrin light chain binding	Hs	molecular function	102	1.64e-21
phosphatidylinositol-3-phosphate binding	Hs	molecular function	102	1.64e-21
ruffle membrane	Hs	cellular component	2818	0.0
phosphatidylinositol binding	Hs	molecular function	2818	0.0
glutamate receptor binding	Hs	molecular function	102	1.64e-21
AP-2 adaptor complex binding	Hs	molecular function	102	1.64e-21
clathrin adaptor activity	Hs	molecular function	102	1.64e-21
protein homodimerization activity	Hs	molecular function	102	1.64e-21
cell projection	Hs	cellular component	2818	0.0
intracellular membrane-bounded organelle	Hs	cellular component	102	1.64e-21
phosphatidylinositol-3,4-bisphosphate binding	Hs	molecular function	102	1.64e-21
synapse	Hs	cellular component	2848	0.0
cadherin binding	Hs	molecular function	2818	0.0
protein heterodimerization activity	Hs	molecular function	102	1.64e-21
actin filament binding	Hs	molecular function	2848	0.0
extracellular exosome	Hs	cellular component	2818	0.0
phosphatidylinositol-3,5-bisphosphate binding	Hs	molecular function	102	1.64e-21
presynapse	Hs	cellular component	102	1.64e-21
postsynapse	Hs	cellular component	102	1.64e-21
extrinsic component of presynaptic membrane	Hs	cellular component	102	1.64e-21
extrinsic component of postsynaptic membrane	Hs	cellular component	102	1.64e-21

GO (InterProScan)

8 results

GO Term	Analysis	Type	e-value
ruffle	Pfam	cellular component	1.5E-55
actin binding	SMART	molecular function	1.4E-86
structural constituent of cytoskeleton	Pfam	molecular function	1.5E-55
cytoskeleton	ProSiteProfiles	cellular component	56.511
focal adhesion	Pfam	cellular component	1.5E-55
cytoskeletal anchoring at plasma membrane	Pfam	biological process	1.5E-55
cell adhesion	SUPERFAMILY	biological process	6.28E-33
actin filament binding	SUPERFAMILY	molecular function	6.28E-33

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences