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GENE CARD

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Gene Card

Best human hits

CFAP52; EML6; WDR90

Unique Gene ID

Cirobu.g00005331

Gene Model ID

KH2012:KH.C3.173

Location

KhC3:4132421..4144808

Transcript Models and Sequences

  KH2012:KH.C3.173.v1.A.ND1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000004400
Collections

Gateway full ORF

2 results

cien157748

Plate: VES94_G16

cien162786

Plate: VES95_O10

Gene collection 1 (N. Satoh)

2 results

cieg005d18

Plate: R1CiGC16o13

ciad015g24

Plate: R1CiGC02l01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat Pfam WD40 repeat
WDR90 PANTHER WD repeat-containing protein 90
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat SMART WD40 repeat

GOSlim

7 results

GO Term Annotation Origin Type
protein binding Blast molecular function
cytoplasm Blast cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
microtubule binding Blast molecular function
microtubule cytoskeleton Blast cellular component
cell projection Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 279 2.99e-81
cytoplasm Hs cellular component 84.0 6.44e-17
cytoskeleton Hs cellular component 69.3 4.67e-12
microtubule Hs cellular component 69.3 4.67e-12
microtubule binding Hs molecular function 69.3 4.67e-12
microtubule cytoskeleton Hs cellular component 69.3 4.67e-12
cell projection Hs cellular component 84.0 6.44e-17

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 8.3E-42