Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000008563
ENSEMBL	ENSCING00000009884
ENSEMBL	ENSCING00000023647
NCBI Reference Sequence	XM_018811298.1

Collections

Gene collection 1 (N. Satoh)

4 results

ciht025d03

Plate: R1CiGC43d02

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

28 results

IPR Term	Analysis	Definition
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Laminin_EGF	ProSitePatterns	Laminin EGF domain
ConA-like_dom_sf	SUPERFAMILY	Concanavalin A-like lectin/glucanase domain superfamily
Ig-like_dom_sf	SUPERFAMILY	Immunoglobulin-like domain superfamily
LDrepeatLR_classA_rpt	ProSiteProfiles	Low-density lipoprotein (LDL) receptor class A repeat
Laminin_EGF	ProSiteProfiles	Laminin EGF domain
Laminin_G	Pfam	Laminin G domain
LDrepeatLR_classA_rpt	CDD	Low-density lipoprotein (LDL) receptor class A repeat
Laminin_G	SMART	Laminin G domain
Laminin_G	ProSiteProfiles	Laminin G domain
Ig-like_dom	ProSiteProfiles	Immunoglobulin-like domain
Immunoglobulin	Pfam	Immunoglobulin
LDrepeatLR_classA_rpt	Pfam	Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt	SMART	Low-density lipoprotein (LDL) receptor class A repeat
Laminin_EGF	SMART	Laminin EGF domain
Laminin_IV	ProSiteProfiles	Laminin IV
LDrepeatLR_classA_rpt	PRINTS	Low-density lipoprotein (LDL) receptor class A repeat
LDL_receptor-like_sf	SUPERFAMILY	LDL receptor-like superfamily
LDLR_class-A_CS	ProSitePatterns	Low-density lipoprotein (LDL) receptor class A, conserved site
EGF-like_dom	SMART	EGF-like domain
EGF-like_CS	ProSitePatterns	EGF-like, conserved site
Ig_sub	SMART	Immunoglobulin subtype
EGF-like_dom	ProSiteProfiles	EGF-like domain
Laminin_EGF	Pfam	Laminin EGF domain
Ig_I-set	Pfam	Immunoglobulin I-set
Laminin_IV	SMART	Laminin IV
Laminin_IV	Pfam	Laminin IV
Ig_sub2	SMART	Immunoglobulin subtype 2

GOSlim

35 results

GO Term	Annotation Origin	Type
angiogenesis	Orthology	biological process
receptor binding	Orthology	molecular function
structural molecule activity	Blast	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
cytoplasm	Blast	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
brain development	Orthology	biological process
protein C-terminus binding	Orthology	molecular function
cell junction	Blast	cellular component
cell differentiation	Orthology	biological process
extracellular matrix organization	Orthology	biological process
metal ion binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
cardiovascular system development	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
extracellular region part	Orthology	cellular component
Golgi apparatus part	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
defense response	Orthology	biological process
cellular process	Orthology	biological process
lysosome	Orthology	cellular component
vacuolar part	Orthology	cellular component
plasma membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
plasma membrane region	Blast	cellular component
postsynapse	Blast	cellular component

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
retinoid metabolic process	Hs	biological process
angiogenesis	Hs	biological process
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
basement membrane	Hs	cellular component
extracellular space	Hs	cellular component
Golgi lumen	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
glycosaminoglycan biosynthetic process	Hs	biological process
glycosaminoglycan catabolic process	Hs	biological process
lipid metabolic process	Hs	biological process
receptor-mediated endocytosis	Hs	biological process
inflammatory response	Hs	biological process
brain development	Hs	biological process
protein C-terminus binding	Hs	molecular function
cell growth	Hs	biological process
negative regulation of angiogenesis	Hs	biological process
cell differentiation	Hs	biological process
extracellular matrix organization	Hs	biological process
glycosaminoglycan metabolic process	Hs	biological process
extracellular matrix	Hs	cellular component
lysosomal lumen	Hs	cellular component
metal ion binding	Hs	molecular function
low-density lipoprotein particle receptor binding	Hs	molecular function
extracellular exosome	Hs	cellular component
cardiovascular system development	Hs	biological process
plasma membrane protein complex	Hs	cellular component

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
receptor binding	Hs	molecular function	315	1.14e-85
structural molecule activity	Hs	molecular function	315	1.14e-85
calcium ion binding	Hs	molecular function	1440	0.0
protein binding	Hs	molecular function	1440	0.0
extracellular region	Hs	cellular component	1440	0.0
proteinaceous extracellular matrix	Hs	cellular component	1440	0.0
basement membrane	Hs	cellular component	1440	0.0
basal lamina	Hs	cellular component	315	1.14e-85
extracellular space	Hs	cellular component	1440	0.0
cytoplasm	Hs	cellular component	333	8.33e-91
Golgi lumen	Hs	cellular component	1440	0.0
plasma membrane	Hs	cellular component	1440	0.0
focal adhesion	Hs	cellular component	1440	0.0
cell cortex	Hs	cellular component	333	8.33e-91
protein C-terminus binding	Hs	molecular function	1440	0.0
cell junction	Hs	cellular component	333	8.33e-91
extracellular matrix	Hs	cellular component	1440	0.0
cleavage furrow	Hs	cellular component	333	8.33e-91
sarcolemma	Hs	cellular component	315	1.14e-85
dendritic spine	Hs	cellular component	315	1.14e-85
lysosomal lumen	Hs	cellular component	1440	0.0
metal ion binding	Hs	molecular function	1440	0.0
low-density lipoprotein particle receptor binding	Hs	molecular function	1440	0.0
extracellular exosome	Hs	cellular component	1440	0.0
plasma membrane protein complex	Hs	cellular component	1440	0.0

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	PRINTS	molecular function	2.3E-20

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences