Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
NCBI Reference Sequence	XM_002129062.3
NCBI Reference Sequence	XM_004225791.3
NCBI Reference Sequence	XM_009859725.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb029p07

Plate: R1CiGC31d23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
PH-like_dom_sf	Gene3D	PH-like domain superfamily
Ran_bind_dom	ProSiteProfiles	Ran binding domain
Ran_bind_dom	Pfam	Ran binding domain
Ran_bind_dom	SMART	Ran binding domain

GOSlim

43 results

GO Term	Annotation Origin	Type
G1/S transition of mitotic cell cycle	Orthology	biological process
RNA binding	Blast	molecular function
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
nucleus	Orthology	cellular component
nuclear envelope	Orthology	cellular component
cytoplasm	Orthology	cellular component
centrosome	Orthology	cellular component
cytosol	Orthology	cellular component
signal transduction	Orthology	biological process
membrane	Blast	cellular component
transferase activity	Blast	molecular function
nuclear membrane	Blast	cellular component
positive regulation of GTPase activity	Orthology	biological process
metal ion binding	Blast	molecular function
intracellular transport	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
guanyl ribonucleotide binding	Orthology	molecular function
anion binding	Orthology	molecular function
GTPase regulator activity	Orthology	molecular function
purine ribonucleoside binding	Orthology	molecular function
organic substance transport	Orthology	biological process
proteolysis	Orthology	biological process
intracellular protein transport	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
microtubule-based process	Orthology	biological process
organelle organization	Orthology	biological process
enzyme binding	Orthology	molecular function
neuron projection development	Orthology	biological process
cytoplasmic part	Orthology	cellular component
cell projection part	Orthology	cellular component
plasma membrane region	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
axon	Orthology	cellular component
catalytic activity	Blast	molecular function
cellular protein modification process	Blast	biological process
nuclear outer membrane-endoplasmic reticulum membrane network	Blast	cellular component
membrane region	Blast	cellular component
macromolecular complex	Blast	cellular component
ubiquitin-like protein transferase activity	Blast	molecular function
protein modification by small protein conjugation	Blast	biological process
nuclear part	Blast	cellular component

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
GDP-dissociation inhibitor activity	Hs	molecular function
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
nucleus	Hs	cellular component
nuclear envelope	Hs	cellular component
cytoplasm	Hs	cellular component
centrosome	Hs	cellular component
cytosol	Hs	cellular component
RNA export from nucleus	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
protein import into nucleus	Hs	biological process
spindle organization	Hs	biological process
signal transduction	Hs	biological process
Ran GTPase binding	Hs	molecular function
positive regulation of neuron projection development	Hs	biological process
viral process	Hs	biological process
cell projection cytoplasm	Hs	cellular component
positive regulation of GTPase activity	Hs	biological process
cadherin binding	Hs	molecular function
positive regulation of mitotic centrosome separation	Hs	biological process
intracellular transport	Hs	biological process
regulation of catalytic activity	Hs	biological process
response to calcium ion	Hs	biological process
axon cytoplasm	Hs	cellular component

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	138	4.91e-37
peptidyl-prolyl cis-trans isomerase activity	Hs	molecular function	138	4.91e-37
GDP-dissociation inhibitor activity	Hs	molecular function	188	3.78e-59
GTPase activator activity	Hs	molecular function	188	3.78e-59
protein binding	Hs	molecular function	188	3.78e-59
intracellular	Hs	cellular component	188	3.78e-59
nucleus	Hs	cellular component	188	3.78e-59
nuclear envelope	Hs	cellular component	188	3.78e-59
annulate lamellae	Hs	cellular component	138	4.91e-37
nuclear pore	Hs	cellular component	138	4.91e-37
cytoplasm	Hs	cellular component	188	3.78e-59
centrosome	Hs	cellular component	188	3.78e-59
cytosol	Hs	cellular component	188	3.78e-59
Ran GTPase binding	Hs	molecular function	188	3.78e-59
membrane	Hs	cellular component	138	4.91e-37
transferase activity	Hs	molecular function	138	4.91e-37
SUMO transferase activity	Hs	molecular function	138	4.91e-37
nuclear membrane	Hs	cellular component	138	4.91e-37
cell projection cytoplasm	Hs	cellular component	188	3.78e-59
nuclear inclusion body	Hs	cellular component	138	4.91e-37
host cell	Hs	cellular component	138	4.91e-37
nuclear pore cytoplasmic filaments	Hs	cellular component	138	4.91e-37
nuclear pore nuclear basket	Hs	cellular component	138	4.91e-37
cadherin binding	Hs	molecular function	188	3.78e-59
metal ion binding	Hs	molecular function	138	4.91e-37
axon cytoplasm	Hs	cellular component	188	3.78e-59

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
intracellular transport	SMART	biological process	6.5E-49

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences