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GENE CARD

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Gene Card

Best human hits

CYB5A; CYB5B; FA2H

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005380

Gene Model ID

KH2012:KH.C3.217

Location

KhC3:5654023..5662138

Transcript Models and Sequences

  KH2012:KH.C3.217.v1.R.ND3-1
KH2012:KH.C3.217.v2.C.SL1-1
KH2012:KH.C3.217.v2.C.SL2-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000008907
Collections

Gateway full ORF

2 results

cien74712

Plate: VES82_N03

cien202163

Plate: VES101_K17

Gene collection 1 (N. Satoh)

2 results

cilv002l15

Plate: R1CiGC25e05

cieg053k21

Plate: R1CiGC24e15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Fatty_acid_hydroxylase Pfam Fatty acid hydroxylase
Cyt_B5-like_heme/steroid_sf Gene3D Cytochrome b5-like heme/steroid binding domain superfamily
Cyt_B5-like_heme/steroid_sf SUPERFAMILY Cytochrome b5-like heme/steroid binding domain superfamily
Cyt_B5-like_heme/steroid-bd Pfam Cytochrome b5-like heme/steroid binding domain
Cyt_B5_heme-BS ProSitePatterns Cytochrome b5, heme-binding site
Cyt_B5-like_heme/steroid-bd SMART Cytochrome b5-like heme/steroid binding domain
Scs7 PIRSF Sterol desaturase Scs7
Cyt_B5-like_heme/steroid-bd ProSiteProfiles Cytochrome b5-like heme/steroid binding domain

GOSlim

26 results

GO Term Annotation Origin Type
iron ion binding Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial inner membrane Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Blast cellular component
enzyme activator activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
enzyme binding Blast molecular function
heme binding Blast molecular function
organelle membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
catalytic activity Blast molecular function
transmembrane transport Blast biological process
cellular metabolic process Blast biological process
monovalent inorganic cation transport Blast biological process
whole membrane Blast cellular component
mitochondrial membrane Blast cellular component
bounding membrane of organelle Blast cellular component
organic substance metabolic process InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
aldo-keto reductase (NADP) activity Hs molecular function 48.1 5.45e-07
cytochrome-c oxidase activity Hs molecular function 48.1 5.45e-07
iron ion binding Hs molecular function 313 7.11e-105
protein binding Hs molecular function 55.8 1.87e-09
cytoplasm Hs cellular component 48.1 5.45e-07
mitochondrion Hs cellular component 55.8 1.87e-09
mitochondrial outer membrane Hs cellular component 55.8 1.87e-09
mitochondrial inner membrane Hs cellular component 55.8 1.87e-09
endoplasmic reticulum Hs cellular component 313 7.11e-105
endoplasmic reticulum membrane Hs cellular component 313 7.11e-105
cytosol Hs cellular component 48.1 5.45e-07
enzyme activator activity Hs molecular function 55.8 1.87e-09
membrane Hs cellular component 313 7.11e-105
integral component of membrane Hs cellular component 313 7.11e-105
oxidoreductase activity Hs molecular function 313 7.11e-105
enzyme binding Hs molecular function 48.1 5.45e-07
heme binding Hs molecular function 313 7.11e-105
organelle membrane Hs cellular component 313 7.11e-105
intracellular membrane-bounded organelle Hs cellular component 313 7.11e-105
metal ion binding Hs molecular function 313 7.11e-105
extracellular exosome Hs cellular component 48.1 5.45e-07
fatty acid alpha-hydroxylase activity Hs molecular function 313 7.11e-105

GO (InterProScan)

8 results

GO Term Analysis Type e-value
iron ion binding Pfam molecular function 2.0E-16
lipid metabolic process PIRSF biological process 3.7E-109
lipid biosynthetic process Pfam biological process 2.0E-16
integral component of membrane PIRSF cellular component 3.7E-109
oxidoreductase activity Pfam molecular function 2.0E-16
heme binding ProSitePatterns molecular function
oxidation-reduction process Pfam biological process 2.0E-16
fatty acid alpha-hydroxylase activity PIRSF molecular function 3.7E-109

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