Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008942
ENSEMBL	ENSCING00000024567
NCBI Reference Sequence	NM_001032584.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad040l12

Plate: R1CiGC04m24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
CoA-bd	Pfam	CoA-binding
Citrt_syn/SCS-alpha_CS	ProSitePatterns	ATP-citrate lyase/succinyl-CoA ligase, conserved site
Citrate_synthase	Pfam	Citrate synthase
Citrate_synth-like_lrg_a-sub	Gene3D	Citrate synthase-like, large alpha subdomain
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily
Cit_synth/succinyl-CoA_lig_AS	ProSitePatterns	ATP-citrate lyase/succinyl-CoA ligase, active site
Citrate_synth-like_sm_a-sub	Gene3D	Citrate synthase-like, small alpha subdomain
CoA_ligase	Pfam	ATP-citrate lyase/succinyl-CoA ligase
Citrate_synthase_sf	SUPERFAMILY	Citrate synthase superfamily
Succinyl-CoA_synth-like	Gene3D	Succinyl-CoA synthetase-like

GOSlim

34 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Blast	molecular function
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
extracellular region	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
mitochondrial matrix	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
metabolic process	Orthology	biological process
membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
ligase activity	Blast	molecular function
metal ion binding	Orthology	molecular function
cofactor binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
phosphate-containing compound metabolic process	Orthology	biological process
amide biosynthetic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
cellular biosynthetic process	Orthology	biological process
cytoplasmic part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
nucleobase-containing compound metabolic process	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
lysosome	Orthology	cellular component
vacuolar part	Orthology	cellular component
endomembrane system	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
intracellular organelle part	Orthology	cellular component

GO (Orthology)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
catalytic activity	Hs	molecular function
ATP citrate synthase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
extracellular region	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
acetyl-CoA biosynthetic process	Hs	biological process
citrate metabolic process	Hs	biological process
oxaloacetate metabolic process	Hs	biological process
lipid metabolic process	Hs	biological process
fatty acid biosynthetic process	Hs	biological process
cholesterol biosynthetic process	Hs	biological process
metabolic process	Hs	biological process
lipid biosynthetic process	Hs	biological process
citrate lyase complex	Hs	cellular component
coenzyme A metabolic process	Hs	biological process
membrane	Hs	cellular component
transferase activity	Hs	molecular function
lyase activity	Hs	molecular function
azurophil granule lumen	Hs	cellular component
metal ion binding	Hs	molecular function
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	Hs	molecular function
cofactor binding	Hs	molecular function
extracellular exosome	Hs	cellular component
ficolin-1-rich granule lumen	Hs	cellular component

GO (Blast)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	908	0.0
RNA binding	Hs	molecular function	66.6	8.62e-12
catalytic activity	Hs	molecular function	908	0.0
ATP citrate synthase activity	Hs	molecular function	908	0.0
succinate-CoA ligase (ADP-forming) activity	Hs	molecular function	66.6	8.62e-12
succinate-CoA ligase (GDP-forming) activity	Hs	molecular function	66.6	8.62e-12
protein binding	Hs	molecular function	908	0.0
ATP binding	Hs	molecular function	908	0.0
extracellular region	Hs	cellular component	908	0.0
nucleoplasm	Hs	cellular component	908	0.0
cytoplasm	Hs	cellular component	908	0.0
mitochondrion	Hs	cellular component	66.6	8.62e-12
mitochondrial inner membrane	Hs	cellular component	66.6	8.62e-12
mitochondrial matrix	Hs	cellular component	66.6	8.62e-12
cytosol	Hs	cellular component	908	0.0
plasma membrane	Hs	cellular component	908	0.0
citrate lyase complex	Hs	cellular component	908	0.0
membrane	Hs	cellular component	908	0.0
transferase activity	Hs	molecular function	908	0.0
lyase activity	Hs	molecular function	908	0.0
ligase activity	Hs	molecular function	66.6	8.62e-12
azurophil granule lumen	Hs	cellular component	908	0.0
metal ion binding	Hs	molecular function	908	0.0
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	Hs	molecular function	908	0.0
cofactor binding	Hs	molecular function	908	0.0
extracellular exosome	Hs	cellular component	908	0.0
ficolin-1-rich granule lumen	Hs	cellular component	908	0.0

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
catalytic activity	Pfam	molecular function	2.8E-17
metabolic process	Pfam	biological process	2.8E-17
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	SUPERFAMILY	molecular function	2.62E-80
cofactor binding	Pfam	molecular function	1.5E-5

Gene Card

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