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GENE CARD

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Gene Card

Best human hits

CADM1; CADM3; GPA33

Unique Gene ID

Cirobu.g00005430

Gene Model ID

KH2012:KH.C3.264

Location

KhC3:3829642..3837892

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000012659
Collections

Gateway full ORF

2 results

cima895110

Plate: VES71_N16

cima8101032

Plate: VES73_O01

Gene collection 1 (N. Satoh)

1 result

citb6g3

Plate: R1CiGC29h05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig/MHC_CS ProSitePatterns Immunoglobulin/major histocompatibility complex, conserved site
Ig_sub SMART Immunoglobulin subtype
Ig_V-set SMART Immunoglobulin V-set domain
CD80_C2-set Pfam CD80-like, immunoglobulin C2-set
Nectin-2 PANTHER Nectin-2
Ig_V-set Pfam Immunoglobulin V-set domain

GOSlim

16 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
protein binding Blast molecular function
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cell adhesion InterProScan biological process
spermatogenesis InterProScan biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
cell junction Blast cellular component
protein homodimerization activity Blast molecular function
synapse Blast cellular component
cell adhesion molecule binding Blast molecular function
extracellular exosome Blast cellular component
adherens junction Blast cellular component
cell development InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
receptor activity Hs molecular function 55.5 3.50e-08
receptor binding Hs molecular function 46.6 3.40e-05
protein binding Hs molecular function 55.5 3.50e-08
plasma membrane Hs cellular component 46.6 3.40e-05
integral component of plasma membrane Hs cellular component 55.5 3.50e-08
cell-cell junction Hs cellular component 46.6 3.40e-05
cell-cell adherens junction Hs cellular component 46.6 3.40e-05
membrane Hs cellular component 55.5 3.50e-08
integral component of membrane Hs cellular component 55.5 3.50e-08
basolateral plasma membrane Hs cellular component 46.6 3.40e-05
cell junction Hs cellular component 46.6 3.40e-05
PDZ domain binding Hs molecular function 46.6 3.40e-05
protein homodimerization activity Hs molecular function 46.6 3.40e-05
synapse Hs cellular component 46.6 3.40e-05
cell adhesion molecule binding Hs molecular function 46.6 3.40e-05
extracellular exosome Hs cellular component 55.5 3.50e-08

GO (InterProScan)

5 results

GO Term Analysis Type e-value
cell-cell junction PANTHER cellular component 6.2E-20
cell adhesion PANTHER biological process 6.2E-20
protein homodimerization activity PANTHER molecular function 6.2E-20
cell adhesion molecule binding PANTHER molecular function 6.2E-20
spermatid development PANTHER biological process 6.2E-20