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GENE CARD

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Gene Card

Best human hits

AC106886.5; EP400; SRCAP

Unique Gene ID

Cirobu.g00005470

Gene Model ID

KH2012:KH.C3.30

Location

KhC3:4450826..4480679

Collections

Gateway full ORF

2 results

cien160918

Plate: VES95_O05

cien179806

Plate: VES98_M01

Gene collection 1 (N. Satoh)

6 results

citb2m7

Plate: R1CiGC28h16

cieg010c19

Plate: R1CiGC17m03

cicl030o24

Plate: R1CiGC12c16

cieg059o12

Plate: R1CiGC39l20

cieg060h05

Plate: R1CiGC39l24

citb057f04

Plate: R1CiGC45n20

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Helicase_C CDD Helicase, C-terminal
Helicase_C Pfam Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
HSA_dom SMART Helicase/SANT-associated domain
Helicase_C ProSiteProfiles Helicase, C-terminal
HSA_dom ProSiteProfiles Helicase/SANT-associated domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
SNF2_N Pfam SNF2-related, N-terminal domain
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
HSA_dom Pfam Helicase/SANT-associated domain
Helicase_C SMART Helicase, C-terminal
SNF2-like_sf Gene3D SNF2-like, N-terminal domain superfamily
Myb-like_dom ProSiteProfiles Myb-like domain

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Orthology molecular function
transcription coactivator activity Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
Golgi apparatus Blast cellular component
nuclear body Blast cellular component
nuclear speck Orthology cellular component
hydrolase activity Orthology molecular function
macromolecular complex Orthology cellular component
perinuclear region of cytoplasm Blast cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
nucleoplasm part Orthology cellular component
nucleoside-triphosphatase activity Orthology molecular function
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
transferase activity Blast molecular function

GO (Orthology)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
Swr1 complex Hs cellular component
DNA binding Hs molecular function
chromatin binding Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromatin organization Hs biological process
nuclear speck Hs cellular component
hydrolase activity Hs molecular function
NuA4 histone acetyltransferase complex Hs cellular component
histone H4 acetylation Hs biological process
histone H2A acetylation Hs biological process
protein antigen binding Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 662 0.0
Swr1 complex Hs cellular component 486 2.47e-138
DNA binding Hs molecular function 662 0.0
chromatin binding Hs molecular function 486 2.47e-138
transcription coactivator activity Hs molecular function 662 0.0
helicase activity Hs molecular function 662 0.0
histone acetyltransferase activity Hs molecular function 662 0.0
protein binding Hs molecular function 662 0.0
ATP binding Hs molecular function 662 0.0
nucleus Hs cellular component 662 0.0
nucleoplasm Hs cellular component 662 0.0
Golgi apparatus Hs cellular component 662 0.0
nuclear body Hs cellular component 662 0.0
nuclear speck Hs cellular component 486 2.47e-138
hydrolase activity Hs molecular function 662 0.0
macromolecular complex Hs cellular component 662 0.0
NuA4 histone acetyltransferase complex Hs cellular component 486 2.47e-138
perinuclear region of cytoplasm Hs cellular component 662 0.0
protein antigen binding Hs molecular function 486 2.47e-138

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ATP binding Pfam molecular function 4.8E-69