Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005021
NCBI Reference Sequence	NM_001078216.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad039g19

Plate: R1CiGC04g10

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
bHLH_dom	Pfam	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	CDD	Myc-type, basic helix-loop-helix (bHLH) domain
Orange_dom	Pfam	Orange domain
bHLH_dom	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain
Orange_dom	ProSiteProfiles	Orange domain
HLH_DNA-bd_sf	Gene3D	Helix-loop-helix DNA-binding domain superfamily
bHLH_dom	SMART	Myc-type, basic helix-loop-helix (bHLH) domain
Orange_dom	SMART	Orange domain
HLH_DNA-bd_sf	SUPERFAMILY	Helix-loop-helix DNA-binding domain superfamily

GOSlim

25 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription cofactor activity	Orthology	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
transcription factor binding	Orthology	molecular function
cell differentiation	Orthology	biological process
protein homodimerization activity	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
protein dimerization activity	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcription cofactor activity	Hs	molecular function
nucleus	Hs	cellular component
transcription factor complex	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
transcription factor binding	Hs	molecular function
cell differentiation	Hs	biological process
protein dimerization activity	Hs	molecular function

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	88.2	2.11e-20
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	144	4.30e-41
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	144	4.30e-41
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	88.2	2.11e-20
DNA binding	Hs	molecular function	144	4.30e-41
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	144	4.30e-41
transcription cofactor activity	Hs	molecular function	88.2	2.11e-20
protein binding	Hs	molecular function	144	4.30e-41
intracellular	Hs	cellular component	144	4.30e-41
nucleus	Hs	cellular component	144	4.30e-41
nucleoplasm	Hs	cellular component	144	4.30e-41
transcription factor complex	Hs	cellular component	88.2	2.11e-20
cytoplasm	Hs	cellular component	144	4.30e-41
transcription factor binding	Hs	molecular function	144	4.30e-41
protein homodimerization activity	Hs	molecular function	144	4.30e-41
histone deacetylase binding	Hs	molecular function	144	4.30e-41
sequence-specific DNA binding	Hs	molecular function	144	4.30e-41
protein dimerization activity	Hs	molecular function	144	4.30e-41
chaperone binding	Hs	molecular function	144	4.30e-41
N-box binding	Hs	molecular function	144	4.30e-41

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	Pfam	molecular function	6.0E-13
regulation of transcription, DNA-templated	Pfam	biological process	6.0E-13
protein dimerization activity	Gene3D	molecular function	9.6E-24

Gene Card

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