Gene Card
Best human hits
COMP; THBS3; THBS4
Unique Gene ID
Cirobu.g00005487
Gene Model ID
KH2012:KH.C3.316
Location
KhC3:6601571..6616283
Transcript Models and Sequences
KH2012:KH.C3.316.v1.C.nonSL4-1
KH2012:KH.C3.316.v1.R.ND2-1
KH2012:KH.C3.316.v2.C.nonSL3-1
KH2012:KH.C3.316.v3.C.nonSL4-1
KH2012:KH.C3.316.v3.R.ND1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000008607 |
| NCBI Reference Sequence | NM_001128117.1 |
Gateway full ORF
3 results
Gene collection 1 (N. Satoh)
3 results
n/a
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Click here to see the tree inference method
InterPro
15 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Thrombospondin_C | ProSiteProfiles | Thrombospondin, C-terminal |
| EGF-like_Ca-bd_dom | SMART | EGF-like calcium-binding domain |
| TSP_type-3_rpt | SUPERFAMILY | TSP type-3 repeat |
| EGF-like_dom | SMART | EGF-like domain |
| Thrombospondin_3_rpt | ProSiteProfiles | Thrombospondin, type 3 repeat |
| EGF-like_Ca-bd_dom | Pfam | EGF-like calcium-binding domain |
| TSP_type-3_rpt | Gene3D | TSP type-3 repeat |
| Thrombospondin_3-like_rpt | Pfam | Thrombospondin, type 3-like repeat |
| EGF_Ca-bd_CS | ProSitePatterns | EGF-like calcium-binding, conserved site |
| Thbs/COMP_coiled-coil | Pfam | Thrombospondin/cartilage oligomeric matrix protein, coiled-coil domain |
| EGF-like_dom | ProSiteProfiles | EGF-like domain |
| Thrombospondin_C | Pfam | Thrombospondin, C-terminal |
| ConA-like_dom_sf | SUPERFAMILY | Concanavalin A-like lectin/glucanase domain superfamily |
| Thrombospondin | PANTHER | Thrombospondin |
| Laminin_G | SMART | Laminin G domain |
GOSlim
20 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| integrin binding | Blast | molecular function |
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| endoplasmic reticulum | Blast | cellular component |
| cell adhesion | InterProScan | biological process |
| extracellular matrix organization | InterProScan | biological process |
| perinuclear region of cytoplasm | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| extracellular region part | Blast | cellular component |
| structural molecule activity | Blast | molecular function |
| macromolecular complex binding | Blast | molecular function |
| receptor binding | Blast | molecular function |
| molecular function regulator | Blast | molecular function |
| regulation of signal transduction | Blast | biological process |
| signaling receptor activity | Blast | molecular function |
| anion binding | Blast | molecular function |
| carbohydrate derivative binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| protease binding | Hs | molecular function | 745 | 0.0 |
| integrin binding | Hs | molecular function | 816 | 0.0 |
| extracellular matrix structural constituent | Hs | molecular function | 745 | 0.0 |
| calcium ion binding | Hs | molecular function | 855 | 0.0 |
| protein binding | Hs | molecular function | 816 | 0.0 |
| collagen binding | Hs | molecular function | 745 | 0.0 |
| extracellular region | Hs | cellular component | 855 | 0.0 |
| proteinaceous extracellular matrix | Hs | cellular component | 816 | 0.0 |
| basement membrane | Hs | cellular component | 816 | 0.0 |
| extracellular space | Hs | cellular component | 816 | 0.0 |
| endoplasmic reticulum | Hs | cellular component | 816 | 0.0 |
| growth factor activity | Hs | molecular function | 816 | 0.0 |
| heparin binding | Hs | molecular function | 855 | 0.0 |
| sarcoplasmic reticulum | Hs | cellular component | 816 | 0.0 |
| extracellular matrix | Hs | cellular component | 855 | 0.0 |
| heparan sulfate proteoglycan binding | Hs | molecular function | 745 | 0.0 |
| perinuclear region of cytoplasm | Hs | cellular component | 855 | 0.0 |
| extracellular exosome | Hs | cellular component | 816 | 0.0 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| calcium ion binding | Pfam | molecular function | 1.6E-93 |
| extracellular region | Pfam | cellular component | 1.6E-93 |
| cell adhesion | Pfam | biological process | 1.6E-93 |
| extracellular matrix organization | PANTHER | biological process | 0.0 |
| extracellular matrix | PANTHER | cellular component | 0.0 |
