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GENE CARD

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Gene Card

Best human hits

BROX; PDCD6IP; PTPN23

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005532

Gene Model ID

KH2012:KH.C3.359

Location

KhC3:1805463..1813608

Transcript Models and Sequences

  KH2012:KH.C3.359.v1.C.SL1-2
KH2012:KH.C3.359.v1.C.SL2-2
KH2012:KH.C3.359.v2.C.SL1-1
KH2012:KH.C3.359.v2.C.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000009494
ENSEMBL ENSCING00000018809
NCBI Reference Sequence XM_002132140.4
Collections

Gateway full ORF

2 results

cima899813

Plate: VES72_A16

cien171993

Plate: VES96_H20

Gene collection 1 (N. Satoh)

2 results

citb9p15

Plate: R1CiGC30c23

cieg030e19

Plate: R1CiGC20b01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
BRO1_dom SMART BRO1 domain
BRO1_dom ProSiteProfiles BRO1 domain
BRO1_sf Gene3D BRO1 domain superfamily
BRO1_dom Pfam BRO1 domain

GOSlim

35 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
focal adhesion Blast cellular component
protein dephosphorylation Blast biological process
membrane Orthology cellular component
dephosphorylation Blast biological process
nuclear body Blast cellular component
hydrolase activity Blast molecular function
protein kinase binding Blast molecular function
cell junction Blast cellular component
cytoplasmic vesicle Blast cellular component
melanosome Blast cellular component
protein homodimerization activity Blast molecular function
cell projection Blast cellular component
myelin sheath Blast cellular component
protein dimerization activity Blast molecular function
extracellular exosome Orthology cellular component
extracellular vesicle Blast cellular component
plasma membrane part Blast cellular component
organelle Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component
receptor binding Blast molecular function
cell projection part Blast cellular component
cytoskeletal part Blast cellular component
endoplasmic reticulum part Blast cellular component
midbody Blast cellular component

GO (Orthology)

3 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
membrane Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
immunological synapse Hs cellular component 60.8 9.65e-10
phosphoprotein phosphatase activity Hs molecular function 47.4 1.81e-05
protein tyrosine phosphatase activity Hs molecular function 47.4 1.81e-05
protein binding Hs molecular function 368 7.85e-125
extracellular region Hs cellular component 60.8 9.65e-10
nucleus Hs cellular component 47.4 1.81e-05
nucleoplasm Hs cellular component 47.4 1.81e-05
cytoplasm Hs cellular component 60.8 9.65e-10
endosome Hs cellular component 47.4 1.81e-05
early endosome Hs cellular component 47.4 1.81e-05
microtubule organizing center Hs cellular component 60.8 9.65e-10
cytosol Hs cellular component 60.8 9.65e-10
cytoskeleton Hs cellular component 60.8 9.65e-10
bicellular tight junction Hs cellular component 60.8 9.65e-10
focal adhesion Hs cellular component 60.8 9.65e-10
cilium Hs cellular component 47.4 1.81e-05
membrane Hs cellular component 368 7.85e-125
nuclear body Hs cellular component 47.4 1.81e-05
hydrolase activity Hs molecular function 47.4 1.81e-05
phosphatase activity Hs molecular function 47.4 1.81e-05
protein kinase binding Hs molecular function 47.4 1.81e-05
cell junction Hs cellular component 60.8 9.65e-10
cytoplasmic vesicle Hs cellular component 47.4 1.81e-05
proteinase activated receptor binding Hs molecular function 60.8 9.65e-10
ciliary basal body Hs cellular component 47.4 1.81e-05
melanosome Hs cellular component 60.8 9.65e-10
actomyosin Hs cellular component 60.8 9.65e-10
protein homodimerization activity Hs molecular function 60.8 9.65e-10
cell projection Hs cellular component 47.4 1.81e-05
myelin sheath Hs cellular component 60.8 9.65e-10
protein dimerization activity Hs molecular function 60.8 9.65e-10
calcium-dependent protein binding Hs molecular function 60.8 9.65e-10
extracellular exosome Hs cellular component 368 7.85e-125
endoplasmic reticulum exit site Hs cellular component 60.8 9.65e-10
Flemming body Hs cellular component 60.8 9.65e-10
extracellular vesicle Hs cellular component 60.8 9.65e-10

GO (InterProScan)

No result

GO Term Analysis Type e-value

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