Gene Card
Best human hits
RPAP3; SPAG1; TOMM34
Unique Gene ID
Cirobu.g00005549
Gene Model ID
KH2012:KH.C3.374
Location
KhC3:3647565..3653998
Transcript Models and Sequences
KH2012:KH.C3.374.v1.A.SL2-1
KH2012:KH.C3.374.v1.A.SL3-1
KH2012:KH.C3.374.v2.C.SL1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000009389 |
| NCBI Reference Sequence | XM_002122216.3 |
Gateway full ORF
1 result
cien121972
Plate: VES89_K08
Gene collection 1 (N. Satoh)
4 results
cieg001n06
Plate: R1CiGC15j23
cilv033c03
Plate: R1CiGC27f08
cits044b17
Plate: R1CiGC35o16
cign016h05
Plate: R1CiGC42c03
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TPR_1 | Pfam | Tetratricopeptide repeat 1 |
| TPR_repeat | ProSiteProfiles | Tetratricopeptide repeat |
| TPR-contain_dom | ProSiteProfiles | Tetratricopeptide repeat-containing domain |
| TPR-like_helical_dom_sf | SUPERFAMILY | Tetratricopeptide-like helical domain superfamily |
| TPR-like_helical_dom_sf | Gene3D | Tetratricopeptide-like helical domain superfamily |
| TPR_repeat | SMART | Tetratricopeptide repeat |
| RPAP3-like_C | Pfam | RNA-polymerase II-associated protein 3-like, C-terminal domain |
| TPR_repeat | Pfam | Tetratricopeptide repeat |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| GTP binding | Orthology | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| mitochondrion | Blast | cellular component |
| cytosol | Orthology | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| hydrolase activity | Orthology | molecular function |
| sexual reproduction | Orthology | biological process |
| whole membrane | Blast | cellular component |
| mitochondrial membrane | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
GO (Orthology)
8 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| GTP binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| single fertilization | Hs | biological process |
| hydrolase activity | Hs | molecular function |
| axonemal dynein complex assembly | Hs | biological process |
GO (Blast)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 412 | 1.89e-128 |
| protein binding | Hs | molecular function | 412 | 1.89e-128 |
| GTP binding | Hs | molecular function | 412 | 1.89e-128 |
| nucleus | Hs | cellular component | 216 | 4.94e-63 |
| nucleoplasm | Hs | cellular component | 216 | 4.94e-63 |
| cytoplasm | Hs | cellular component | 412 | 1.89e-128 |
| mitochondrion | Hs | cellular component | 216 | 4.94e-63 |
| mitochondrial outer membrane | Hs | cellular component | 216 | 4.94e-63 |
| cytosol | Hs | cellular component | 412 | 1.89e-128 |
| membrane | Hs | cellular component | 216 | 4.94e-63 |
| integral component of membrane | Hs | cellular component | 216 | 4.94e-63 |
| hydrolase activity | Hs | molecular function | 412 | 1.89e-128 |
| heat shock protein binding | Hs | molecular function | 216 | 4.94e-63 |
| R2TP complex | Hs | cellular component | 101 | 7.71e-22 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Gene3D | molecular function | 1.6E-40 |
