Aniseed - Gene card

Gene Card

Best human hits

CDC34; UBE2G1; UBE2R2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005571

Gene Model ID

KH2012:KH.C3.394

Location

KhC3:6441581..6452744

Transcript Models and Sequences

KH2012:KH.C3.394.v1.A.nonSL5-1
KH2012:KH.C3.394.v1.A.SL1-1
KH2012:KH.C3.394.v2.A.nonSL5-2
KH2012:KH.C3.394.v2.A.SL1-2
KH2012:KH.C3.394.v3.A.nonSL5-3
KH2012:KH.C3.394.v3.A.SL1-3
KH2012:KH.C3.394.v4.A.nonSL5-1
KH2012:KH.C3.394.v4.A.SL1-1
KH2012:KH.C3.394.v5.A.ND2-2
KH2012:KH.C3.394.v5.A.nonSL3-2
KH2012:KH.C3.394.v5.A.nonSL6-2
KH2012:KH.C3.394.v6.A.SL4-1
KH2012:KH.C3.394.v7.A.SL4-3
KH2012:KH.C3.394.v8.A.SL4-2
KH2012:KH.C3.394.v9.A.SL4-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000024609
NCBI Reference Sequence	XM_002127283.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg007p01

Plate: R1CiGC16n09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
UBQ-conjugating_enzyme/RWD	SUPERFAMILY	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_enzyme/RWD	Gene3D	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugat_E2	ProSiteProfiles	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	CDD	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	Pfam	Ubiquitin-conjugating enzyme E2

GOSlim

24 results

GO Term	Annotation Origin	Type
G1/S transition of mitotic cell cycle	Orthology	biological process
nucleotide binding	Orthology	molecular function
protein polyubiquitination	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cellular protein modification process	Orthology	biological process
cell cycle	Orthology	biological process
protein ubiquitination	Orthology	biological process
nuclear speck	Orthology	cellular component
transferase activity	Orthology	molecular function
ubiquitin protein ligase binding	Orthology	molecular function
cell division	Orthology	biological process
extracellular exosome	Blast	cellular component
DNA replication	Orthology	biological process
proteolysis	Orthology	biological process
positive regulation of apoptotic process	Orthology	biological process
intracellular signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
response to organic substance	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
nucleotide binding	Hs	molecular function
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
DNA replication initiation	Hs	biological process
cellular protein modification process	Hs	biological process
protein monoubiquitination	Hs	biological process
cell cycle	Hs	biological process
protein ubiquitination	Hs	biological process
nuclear speck	Hs	cellular component
transferase activity	Hs	molecular function
ubiquitin protein ligase binding	Hs	molecular function
proteasome-mediated ubiquitin-dependent protein catabolic process	Hs	biological process
positive regulation of neuron apoptotic process	Hs	biological process
negative regulation of cAMP-mediated signaling	Hs	biological process
cell division	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function
ubiquitin conjugating enzyme activity	Hs	molecular function
response to growth factor	Hs	biological process
protein K48-linked ubiquitination	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	307	1.31e-106
ubiquitin-protein transferase activity	Hs	molecular function	307	1.31e-106
protein binding	Hs	molecular function	307	1.31e-106
ATP binding	Hs	molecular function	307	1.31e-106
nucleus	Hs	cellular component	302	1.63e-104
nucleoplasm	Hs	cellular component	302	1.63e-104
cytoplasm	Hs	cellular component	307	1.31e-106
cytosol	Hs	cellular component	307	1.31e-106
nuclear speck	Hs	cellular component	302	1.63e-104
transferase activity	Hs	molecular function	307	1.31e-106
ubiquitin protein ligase binding	Hs	molecular function	307	1.31e-106
ubiquitin protein ligase activity	Hs	molecular function	307	1.31e-106
ubiquitin conjugating enzyme activity	Hs	molecular function	307	1.31e-106
extracellular exosome	Hs	cellular component	162	3.26e-50

GO (InterProScan)