Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000001513

Collections

Gateway full ORF

2 results

cima860596

Plate: VES64_C16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
3-oxo-5_a-steroid_4-DH_C	ProSiteProfiles	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
Ergosterol_biosynth_ERG4_ERG24	Pfam	Ergosterol biosynthesis ERG4/ERG24
Lamin-B_rcpt_of_tudor	Pfam	Lamin-B receptor of TUDOR domain
Tudor	SMART	Tudor domain

GOSlim

26 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nuclear envelope	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
cytosol	Blast	cellular component
integral component of plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
organelle membrane	Orthology	cellular component
nuclear membrane	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
oxidation-reduction process	Orthology	biological process
cytoplasm	InterProScan	cellular component
organelle inner membrane	Orthology	cellular component
organic substance metabolic process	Orthology	biological process
catalytic activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
nucleotide binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
membrane part	Blast	cellular component
whole membrane	Blast	cellular component
nuclear outer membrane-endoplasmic reticulum membrane network	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
lamin binding	Hs	molecular function
nucleus	Hs	cellular component
nuclear envelope	Hs	cellular component
nuclear inner membrane	Hs	cellular component
integral component of nuclear inner membrane	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
lipid metabolic process	Hs	biological process
steroid biosynthetic process	Hs	biological process
cholesterol biosynthetic process	Hs	biological process
steroid metabolic process	Hs	biological process
cholesterol metabolic process	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
sterol biosynthetic process	Hs	biological process
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on the CH-CH group of donors	Hs	molecular function
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Hs	molecular function
integral component of endoplasmic reticulum membrane	Hs	cellular component
organelle membrane	Hs	cellular component
nuclear membrane	Hs	cellular component
intracellular membrane-bounded organelle	Hs	cellular component
receptor complex	Hs	cellular component
delta14-sterol reductase activity	Hs	molecular function
NADP binding	Hs	molecular function
oxidation-reduction process	Hs	biological process
chromo shadow domain binding	Hs	molecular function

GO (Blast)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
DNA binding	Hs	molecular function	318	7.84e-101
RNA binding	Hs	molecular function	318	7.84e-101
protein binding	Hs	molecular function	318	7.84e-101
lamin binding	Hs	molecular function	318	7.84e-101
nucleus	Hs	cellular component	318	7.84e-101
nuclear envelope	Hs	cellular component	318	7.84e-101
nuclear inner membrane	Hs	cellular component	318	7.84e-101
integral component of nuclear inner membrane	Hs	cellular component	318	7.84e-101
nuclear outer membrane	Hs	cellular component	174	8.19e-48
endoplasmic reticulum	Hs	cellular component	260	8.94e-81
endoplasmic reticulum membrane	Hs	cellular component	260	8.94e-81
cytosol	Hs	cellular component	174	8.19e-48
integral component of plasma membrane	Hs	cellular component	260	8.94e-81
sterol delta7 reductase activity	Hs	molecular function	174	8.19e-48
membrane	Hs	cellular component	318	7.84e-101
integral component of membrane	Hs	cellular component	318	7.84e-101
oxidoreductase activity	Hs	molecular function	260	8.94e-81
oxidoreductase activity, acting on the CH-CH group of donors	Hs	molecular function	318	7.84e-101
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Hs	molecular function	318	7.84e-101
integral component of endoplasmic reticulum membrane	Hs	cellular component	260	8.94e-81
organelle membrane	Hs	cellular component	260	8.94e-81
nuclear membrane	Hs	cellular component	318	7.84e-101
intracellular membrane-bounded organelle	Hs	cellular component	260	8.94e-81
receptor complex	Hs	cellular component	260	8.94e-81
7-dehydrocholesterol reductase activity	Hs	molecular function	174	8.19e-48
delta14-sterol reductase activity	Hs	molecular function	318	7.84e-101
NADP binding	Hs	molecular function	260	8.94e-81
chromo shadow domain binding	Hs	molecular function	318	7.84e-101

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
lipid metabolic process	ProSiteProfiles	biological process	9.033
membrane	Pfam	cellular component	7.6E-97
integral component of membrane	ProSiteProfiles	cellular component	9.033
oxidoreductase activity, acting on the CH-CH group of donors	ProSiteProfiles	molecular function	9.033
cytoplasm	ProSiteProfiles	cellular component	9.033

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences