Aniseed - Gene card

Gene Card

Best human hits

RAB11A; RAB11B; RAB25

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005694

Gene Model ID

KH2012:KH.C3.51

Location

KhC3:2154110..2160043

Transcript Models and Sequences

KH2012:KH.C3.51.v1.A.SL1-1
KH2012:KH.C3.51.v1.A.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000009526

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl014f08

Plate: R1CiGC09p22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Small_GTPase	Pfam	Small GTPase superfamily
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain

GOSlim

67 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
protein binding	Orthology	molecular function
GTP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
endosome	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
centrosome	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
cell cycle	Orthology	biological process
microtubule binding	Orthology	molecular function
positive regulation of cell proliferation	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
cell junction	Orthology	cellular component
axon	Orthology	cellular component
neuron projection development	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
vesicle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell projection	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
synapse	Orthology	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
extracellular exosome	Orthology	cellular component
establishment of protein localization to organelle	Orthology	biological process
establishment of protein localization to membrane	Orthology	biological process
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
Golgi apparatus part	Orthology	cellular component
microtubule	Orthology	cellular component
synapse part	Orthology	cellular component
endomembrane system	Orthology	cellular component
neuron part	Orthology	cellular component
cellular component organization	Orthology	biological process
G2/M transition of mitotic cell cycle	Orthology	biological process
anion binding	Orthology	molecular function
guanyl ribonucleotide binding	Orthology	molecular function
purine ribonucleoside binding	Orthology	molecular function
intracellular organelle part	Orthology	cellular component
organelle membrane	Orthology	cellular component
whole membrane	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
microtubule-based process	Orthology	biological process
plasma membrane region	Orthology	cellular component
cell projection membrane	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
cellular process	Orthology	biological process
intracellular transport	Orthology	biological process
cell division	Orthology	biological process
metal ion transport	Orthology	biological process
cellular protein modification process	Orthology	biological process
ion transport	Orthology	biological process
cell adhesion molecule binding	Orthology	molecular function
axonogenesis	Orthology	biological process
chemical synaptic transmission	Orthology	biological process
regulation of signaling	Orthology	biological process
protein localization to membrane	Orthology	biological process
postsynapse	Orthology	cellular component
intrinsic component of membrane	Orthology	cellular component
cellular protein localization	Orthology	biological process

GO (Orthology)

81 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
spindle pole	Hs	cellular component
receptor recycling	Hs	biological process
renal water homeostasis	Hs	biological process
epithelial cell morphogenesis	Hs	biological process
GTPase activity	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
endosome	Hs	cellular component
multivesicular body	Hs	cellular component
Golgi apparatus	Hs	cellular component
trans-Golgi network	Hs	cellular component
centrosome	Hs	cellular component
microtubule organizing center	Hs	cellular component
kinetochore microtubule	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
cell cycle	Hs	biological process
mitotic metaphase plate congression	Hs	biological process
microtubule binding	Hs	molecular function
synaptic vesicle	Hs	cellular component
positive regulation of cell proliferation	Hs	biological process
regulation of multivesicular body size	Hs	biological process
positive regulation of G2/M transition of mitotic cell cycle	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
vesicle-mediated transport	Hs	biological process
GDP binding	Hs	molecular function
syntaxin binding	Hs	molecular function
cell junction	Hs	cellular component
transport vesicle	Hs	cellular component
axon	Hs	cellular component
cytoplasmic vesicle membrane	Hs	cellular component
phagocytic vesicle membrane	Hs	cellular component
synaptic vesicle membrane	Hs	cellular component
astral microtubule organization	Hs	biological process
pseudopodium	Hs	cellular component
neuron projection development	Hs	biological process
pseudopodium membrane	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
myosin V binding	Hs	molecular function
vesicle	Hs	cellular component
cleavage furrow	Hs	cellular component
melanosome transport	Hs	biological process
regulation of cytokinesis	Hs	biological process
macromolecular complex	Hs	cellular component
transferrin transport	Hs	biological process
multivesicular body assembly	Hs	biological process
cell projection	Hs	cellular component
intracellular membrane-bounded organelle	Hs	cellular component
post-translational protein modification	Hs	biological process
regulation of anion transport	Hs	biological process
constitutive secretory pathway	Hs	biological process
regulated exocytosis	Hs	biological process
transcytosis	Hs	biological process
synapse	Hs	cellular component
cadherin binding	Hs	molecular function
phagocytic vesicle	Hs	cellular component
positive regulation of axon extension	Hs	biological process
regulation of long-term neuronal synaptic plasticity	Hs	biological process
plasma membrane to endosome transport	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
regulation of protein transport	Hs	biological process
recycling endosome	Hs	cellular component
recycling endosome membrane	Hs	cellular component
regulation of vesicle-mediated transport	Hs	biological process
extracellular exosome	Hs	cellular component
cellular response to acidic pH	Hs	biological process
establishment of protein localization to organelle	Hs	biological process
protein localization to plasma membrane	Hs	biological process
establishment of protein localization to membrane	Hs	biological process
mitotic spindle assembly	Hs	biological process
postsynaptic recycling endosome	Hs	cellular component
anchored component of synaptic vesicle membrane	Hs	cellular component
positive regulation of protein localization to plasma membrane	Hs	biological process
retrograde transport, endosome to plasma membrane	Hs	biological process
exosomal secretion	Hs	biological process
regulation of protein localization to cell surface	Hs	biological process
regulation of endocytic recycling	Hs	biological process

GO (Blast)

45 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	370	2.78e-132
spindle pole	Hs	cellular component	369	8.10e-132
GTPase activity	Hs	molecular function	370	2.78e-132
protein binding	Hs	molecular function	370	2.78e-132
GTP binding	Hs	molecular function	370	2.78e-132
cytoplasm	Hs	cellular component	370	2.78e-132
mitochondrion	Hs	cellular component	370	2.78e-132
endosome	Hs	cellular component	370	2.78e-132
multivesicular body	Hs	cellular component	369	8.10e-132
Golgi apparatus	Hs	cellular component	369	8.10e-132
trans-Golgi network	Hs	cellular component	369	8.10e-132
centrosome	Hs	cellular component	369	8.10e-132
microtubule organizing center	Hs	cellular component	369	8.10e-132
kinetochore microtubule	Hs	cellular component	369	8.10e-132
cytosol	Hs	cellular component	370	2.78e-132
plasma membrane	Hs	cellular component	369	8.10e-132
microtubule binding	Hs	molecular function	369	8.10e-132
synaptic vesicle	Hs	cellular component	370	2.78e-132
membrane	Hs	cellular component	370	2.78e-132
GDP binding	Hs	molecular function	370	2.78e-132
syntaxin binding	Hs	molecular function	369	8.10e-132
cell junction	Hs	cellular component	370	2.78e-132
transport vesicle	Hs	cellular component	369	8.10e-132
axon	Hs	cellular component	369	8.10e-132
cytoplasmic vesicle membrane	Hs	cellular component	369	8.10e-132
phagocytic vesicle membrane	Hs	cellular component	370	2.78e-132
synaptic vesicle membrane	Hs	cellular component	370	2.78e-132
pseudopodium	Hs	cellular component	260	2.47e-88
pseudopodium membrane	Hs	cellular component	260	2.47e-88
cytoplasmic vesicle	Hs	cellular component	370	2.78e-132
myosin V binding	Hs	molecular function	370	2.78e-132
vesicle	Hs	cellular component	369	8.10e-132
cleavage furrow	Hs	cellular component	369	8.10e-132
macromolecular complex	Hs	cellular component	369	8.10e-132
cell projection	Hs	cellular component	260	2.47e-88
intracellular membrane-bounded organelle	Hs	cellular component	369	8.10e-132
synapse	Hs	cellular component	370	2.78e-132
cadherin binding	Hs	molecular function	370	2.78e-132
phagocytic vesicle	Hs	cellular component	370	2.78e-132
perinuclear region of cytoplasm	Hs	cellular component	369	8.10e-132
recycling endosome	Hs	cellular component	370	2.78e-132
recycling endosome membrane	Hs	cellular component	370	2.78e-132
extracellular exosome	Hs	cellular component	370	2.78e-132
postsynaptic recycling endosome	Hs	cellular component	369	8.10e-132
anchored component of synaptic vesicle membrane	Hs	cellular component	370	2.78e-132

GO (InterProScan)