Aniseed - Gene card

Gene Card

Best human hits

COPS2; COPS4; PSMD11

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005778

Gene Model ID

KH2012:KH.C3.587

Location

KhC3:1971603..1976188

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000009508
NCBI Reference Sequence	XM_002132020.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg005e14

Plate: R1CiGC16o23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
PSMD11	PANTHER	26S Proteasome non-ATPase regulatory subunit 11
PCI_dom	Pfam	Proteasome component (PCI) domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
PCI_dom	SMART	Proteasome component (PCI) domain

GOSlim

43 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
transcription corepressor activity	Blast	molecular function
signal transducer activity	Blast	molecular function
structural molecule activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
membrane	Orthology	cellular component
nuclear speck	Blast	cellular component
cell junction	Blast	cellular component
cytoplasmic vesicle	Orthology	cellular component
synapse	Blast	cellular component
transmembrane transport	Orthology	biological process
extracellular exosome	Orthology	cellular component
negative regulation of canonical Wnt signaling pathway	Orthology	biological process
positive regulation of canonical Wnt signaling pathway	Orthology	biological process
intracellular signal transduction	Orthology	biological process
protein phosphorylation	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
proteolysis	Orthology	biological process
G2/M transition of mitotic cell cycle	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
cytokine-mediated signaling pathway	Orthology	biological process
intracellular organelle part	Orthology	cellular component
endomembrane system	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
immune response	Orthology	biological process
mRNA catabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
cell differentiation	Orthology	biological process
cell-cell signaling	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
immune system process	Orthology	biological process
synapse part	Blast	cellular component
neuron part	Blast	cellular component
nuclear part	Blast	cellular component

GO (Orthology)

38 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
MAPK cascade	Hs	biological process
protein polyubiquitination	Hs	biological process
proteasome complex	Hs	cellular component
structural molecule activity	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
proteasome regulatory particle	Hs	cellular component
ubiquitin-dependent protein catabolic process	Hs	biological process
proteasome regulatory particle, lid subcomplex	Hs	cellular component
negative regulation of G2/M transition of mitotic cell cycle	Hs	biological process
membrane	Hs	cellular component
protein deubiquitination	Hs	biological process
proteasome accessory complex	Hs	cellular component
anaphase-promoting complex-dependent catabolic process	Hs	biological process
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
tumor necrosis factor-mediated signaling pathway	Hs	biological process
secretory granule lumen	Hs	cellular component
NIK/NF-kappaB signaling	Hs	biological process
Fc-epsilon receptor signaling pathway	Hs	biological process
proteasome-mediated ubiquitin-dependent protein catabolic process	Hs	biological process
proteasome assembly	Hs	biological process
regulation of mRNA stability	Hs	biological process
post-translational protein modification	Hs	biological process
stem cell differentiation	Hs	biological process
T cell receptor signaling pathway	Hs	biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	Hs	biological process
transmembrane transport	Hs	biological process
Wnt signaling pathway, planar cell polarity pathway	Hs	biological process
extracellular exosome	Hs	cellular component
interleukin-1-mediated signaling pathway	Hs	biological process
negative regulation of canonical Wnt signaling pathway	Hs	biological process
positive regulation of canonical Wnt signaling pathway	Hs	biological process
regulation of hematopoietic stem cell differentiation	Hs	biological process
ficolin-1-rich granule lumen	Hs	cellular component

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
proteasome complex	Hs	cellular component	607	0.0
transcription corepressor activity	Hs	molecular function	84.3	1.19e-17
signal transducer activity	Hs	molecular function	84.3	1.19e-17
structural molecule activity	Hs	molecular function	607	0.0
protein binding	Hs	molecular function	607	0.0
extracellular region	Hs	cellular component	607	0.0
nucleus	Hs	cellular component	607	0.0
nucleoplasm	Hs	cellular component	607	0.0
cytoplasm	Hs	cellular component	607	0.0
cytosol	Hs	cellular component	607	0.0
proteasome regulatory particle	Hs	cellular component	607	0.0
synaptic vesicle	Hs	cellular component	40.8	0.001
COP9 signalosome	Hs	cellular component	84.3	1.19e-17
proteasome regulatory particle, lid subcomplex	Hs	cellular component	607	0.0
membrane	Hs	cellular component	607	0.0
nuclear speck	Hs	cellular component	40.8	0.001
NEDD8-specific protease activity	Hs	molecular function	40.8	0.001
proteasome accessory complex	Hs	cellular component	607	0.0
cell junction	Hs	cellular component	40.8	0.001
cytoplasmic vesicle	Hs	cellular component	40.8	0.001
secretory granule lumen	Hs	cellular component	607	0.0
synapse	Hs	cellular component	40.8	0.001
extracellular exosome	Hs	cellular component	607	0.0
ficolin-1-rich granule lumen	Hs	cellular component	607	0.0

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	1.8E-18
proteasome assembly	PANTHER	biological process	8.2E-201

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien183118

cien198429

Gene collection 1 (N. Satoh)

cieg005e14

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)