Aniseed - Gene card

Gene Card

Best human hits

NAF1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005889

Gene Model ID

KH2012:KH.C3.690

Location

KhC3:6453336..6458574

Transcript Models and Sequences

KH2012:KH.C3.690.v1.C.SL1-1
KH2012:KH.C3.690.v1.C.SL2-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000008584
ENSEMBL	ENSCING00000023345
NCBI Reference Sequence	XM_002127365.4
NCBI Reference Sequence	XR_001974672.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad053m18

Plate: R1CiGC05j03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Gar1/Naf1_Cbf5-bd_sf	Gene3D	H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain
Transl_B-barrel_sf	SUPERFAMILY	Translation protein, beta-barrel domain superfamily
H/ACA_rnp_Gar1/Naf1	Pfam	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1

GOSlim

6 results

GO Term	Annotation Origin	Type
RNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
macromolecular complex	Blast	cellular component
RNA metabolic process	InterProScan	biological process

GO (Orthology)