Gene Card
Best human hits
ABCF1; ABCF2; ABCF3
Unique Gene ID
Cirobu.g00005921
Gene Model ID
KH2012:KH.C3.719
Location
KhC3:3950263..3960515
Transcript Models and Sequences
KH2012:KH.C3.719.v1.A.SL1-1
KH2012:KH.C3.719.v1.A.SL2-1
KH2012:KH.C3.719.v1.A.SL3-1
External database links
3 results
Gateway full ORF
4 results
cien70853
Plate: VES81_O10
cima8100465
Plate: VES72_H19
cima899353
Plate: VES72_F13
cien204938
Plate: VES102_J02
Gene collection 1 (N. Satoh)
1 result
cicl045b12
Plate: R1CiGC13g01
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| ABC_transporter-like | Pfam | ABC transporter-like |
| AAA+_ATPase | SMART | AAA+ ATPase domain |
| ABC_transporter-like | ProSiteProfiles | ABC transporter-like |
| ABC_transporter_CS | ProSitePatterns | ABC transporter, conserved site |
| ABC_tran_Xtn | Pfam | ABC-transporter extension domain |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Orthology | molecular function |
| nucleus | Blast | cellular component |
| nuclear envelope | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| mitochondrial envelope | Orthology | cellular component |
| cytosol | Blast | cellular component |
| ribosome | Blast | cellular component |
| membrane | Orthology | cellular component |
| nucleoside-triphosphatase activity | Orthology | molecular function |
| plasma membrane part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| integral component of membrane | Orthology | cellular component |
| regulation of gene expression | Blast | biological process |
| cell adhesion molecule binding | Blast | molecular function |
GO (Orthology)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| transporter activity | Hs | molecular function |
| ATP binding | Hs | molecular function |
| mitochondrial envelope | Hs | cellular component |
| membrane | Hs | cellular component |
| ATPase activity | Hs | molecular function |
| ATP-binding cassette (ABC) transporter complex | Hs | cellular component |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 800 | 0.0 |
| RNA binding | Hs | molecular function | 352 | 2.33e-110 |
| transporter activity | Hs | molecular function | 800 | 0.0 |
| protein binding | Hs | molecular function | 414 | 7.50e-136 |
| ATP binding | Hs | molecular function | 800 | 0.0 |
| nucleus | Hs | cellular component | 352 | 2.33e-110 |
| nuclear envelope | Hs | cellular component | 352 | 2.33e-110 |
| nucleoplasm | Hs | cellular component | 352 | 2.33e-110 |
| cytoplasm | Hs | cellular component | 352 | 2.33e-110 |
| mitochondrial envelope | Hs | cellular component | 800 | 0.0 |
| cytosol | Hs | cellular component | 352 | 2.33e-110 |
| ribosome | Hs | cellular component | 352 | 2.33e-110 |
| translation factor activity, RNA binding | Hs | molecular function | 352 | 2.33e-110 |
| membrane | Hs | cellular component | 800 | 0.0 |
| ATPase activity | Hs | molecular function | 800 | 0.0 |
| ATP-binding cassette (ABC) transporter complex | Hs | cellular component | 800 | 0.0 |
| cadherin binding | Hs | molecular function | 414 | 7.50e-136 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| ATP binding | Pfam | molecular function | 2.4E-23 |
| ATPase activity | Pfam | molecular function | 2.4E-23 |
