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Gene Card

Best human hits

NUP93

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005981

Gene Model ID

KH2012:KH.C3.776

Location

KhC3:2162252..2169333

Transcript Models and Sequences

  KH2012:KH.C3.776.v1.A.ND1-1
KH2012:KH.C3.776.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000009527
NCBI Reference Sequence XM_002131323.4
Collections

Gateway full ORF

2 results

cima823792

Plate: VES60_L14

cima869045

Plate: VES66_J09

Gene collection 1 (N. Satoh)

1 result

cilv026o10

Plate: R1CiGC27g20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Nucleoporin_int_Nup93/Nic96 Pfam Nucleoporin interacting component Nup93/Nic96
Nucleoporin_int_Nup93/Nic96 PANTHER Nucleoporin interacting component Nup93/Nic96

GOSlim

26 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nuclear envelope Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
nuclear membrane Orthology cellular component
macromolecular complex Orthology cellular component
oxidation-reduction process Orthology biological process
kinase activity Orthology molecular function
intracellular protein transport Orthology biological process
gene expression Orthology biological process
intracellular transport Orthology biological process
organelle organization Orthology biological process
membrane organization Orthology biological process
protein modification by small protein conjugation Orthology biological process
structural molecule activity Orthology molecular function
nuclear lumen Orthology cellular component
organic substance transport Orthology biological process
cell surface receptor signaling pathway Orthology biological process
negative regulation of gene expression Orthology biological process
system development Orthology biological process
cell development Orthology biological process
animal organ development Orthology biological process
negative regulation of cell death Orthology biological process
cellular response to stress Orthology biological process
response to oxidative stress Orthology biological process

GO (Orthology)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
nucleus Hs cellular component
nuclear envelope Hs cellular component
nuclear pore Hs cellular component
regulation of glycolytic process Hs biological process
mRNA export from nucleus Hs biological process
tRNA export from nucleus Hs biological process
nucleocytoplasmic transport Hs biological process
nuclear envelope organization Hs biological process
protein transport Hs biological process
membrane Hs cellular component
viral process Hs biological process
protein sumoylation Hs biological process
poly(A)+ mRNA export from nucleus Hs biological process
structural constituent of nuclear pore Hs molecular function
nuclear membrane Hs cellular component
nuclear periphery Hs cellular component
host cell Hs cellular component
mRNA transport Hs biological process
nuclear pore complex assembly Hs biological process
SMAD protein signal transduction Hs biological process
regulation of gene silencing by miRNA Hs biological process
renal system development Hs biological process
glomerular visceral epithelial cell development Hs biological process
negative regulation of hydrogen peroxide-induced cell death Hs biological process

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 713 0.0
nucleus Hs cellular component 713 0.0
nuclear envelope Hs cellular component 713 0.0
nuclear pore Hs cellular component 713 0.0
membrane Hs cellular component 713 0.0
structural constituent of nuclear pore Hs molecular function 713 0.0
nuclear membrane Hs cellular component 713 0.0
nuclear periphery Hs cellular component 713 0.0
host cell Hs cellular component 713 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nuclear pore PANTHER cellular component 6.4E-269
structural constituent of nuclear pore PANTHER molecular function 6.4E-269

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