Aniseed - Gene card

Gene Card

Best human hits

THNSL1; THNSL2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005988

Gene Model ID

KH2012:KH.C3.783

Location

KhC3:6172642..6176459

Transcript Models and Sequences

KH2012:KH.C3.783.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004958
NCBI Reference Sequence	XM_002125656.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg027f16

Plate: R1CiGC19n24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Trypto_synt_PLP_dependent	SUPERFAMILY	Tryptophan synthase beta subunit-like PLP-dependent enzyme
Thr_synth_N_sf	Gene3D	Threonine synthase, N-terminal domain superfamily
Thr_synth_N	Pfam	Threonine synthase, N-terminal
PLP-dep	Pfam	Pyridoxal-phosphate dependent enzyme

GOSlim

15 results

GO Term	Annotation Origin	Type
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
dephosphorylation	Orthology	biological process
receptor binding	Orthology	molecular function
molecular function regulator	Orthology	molecular function
regulation of signal transduction	Orthology	biological process
signaling receptor activity	Orthology	molecular function
regulation of molecular function	Orthology	biological process
catalytic activity	Orthology	molecular function
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
heterocyclic compound binding	Orthology	molecular function
organic cyclic compound binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
cation binding	Orthology	molecular function

GO (Orthology)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cytokine activity	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
regulation of receptor activity	Hs	biological process
dephosphorylation	Hs	biological process
lyase activity	Hs	molecular function
pyridoxal phosphate binding	Hs	molecular function
serine binding	Hs	molecular function

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cytokine activity	Hs	molecular function	406	2.92e-138
extracellular region	Hs	cellular component	406	2.92e-138
extracellular space	Hs	cellular component	406	2.92e-138
lyase activity	Hs	molecular function	406	2.92e-138
pyridoxal phosphate binding	Hs	molecular function	406	2.92e-138
serine binding	Hs	molecular function	406	2.92e-138

GO (InterProScan)