Aniseed - Gene card

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000010308
ENSEMBL	ENSCING00000024295
NCBI Reference Sequence	XM_009859575.2
NCBI Reference Sequence	XM_018811365.1
NCBI Reference Sequence	XM_018811366.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciht028j06

Plate: R1CiGC43j06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
STAT_N_sf	SUPERFAMILY	STAT transcription factor, N-terminal domain superfamily
STAT_TF_DNA-bd	Pfam	STAT transcription factor, DNA-binding
STAT_TF_DNA-bd_N	Gene3D	STAT transcription factor, DNA-binding, N-terminal
STAT_TF_prot_interaction	SMART	STAT transcription factor, protein interaction
SH2_dom_sf	SUPERFAMILY	SH2 domain superfamily
STAT_TF_alpha	Pfam	STAT transcription factor, all-alpha domain
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
STAT_TF_prot_interaction	Pfam	STAT transcription factor, protein interaction
STAT	PANTHER	Transcription factor STAT
STAT_N_sf	Gene3D	STAT transcription factor, N-terminal domain superfamily
STAT_TF_coiled-coil	SUPERFAMILY	STAT transcription factor, coiled coil
SH2_dom_sf	Gene3D	SH2 domain superfamily

GOSlim

36 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
signal transducer activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
signal transduction	Orthology	biological process
cytokine-mediated signaling pathway	Orthology	biological process
nuclear membrane	Orthology	cellular component
response to cytokine	Orthology	biological process
regulation of cell proliferation	Orthology	biological process
identical protein binding	Orthology	molecular function
sequence-specific DNA binding	Orthology	molecular function
membrane raft	Orthology	cellular component
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein dimerization activity	Blast	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
enzyme binding	Orthology	molecular function
cellular response to stress	Orthology	biological process
response to oxidative stress	Orthology	biological process
protein kinase activity	Blast	molecular function
receptor binding	Blast	molecular function
transcription factor binding	Blast	molecular function

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear chromatin	Hs	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
signal transducer activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
signal transduction	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
protein phosphatase binding	Hs	molecular function
nuclear membrane	Hs	cellular component
positive regulation of type I interferon production	Hs	biological process
response to cytokine	Hs	biological process
regulation of cell proliferation	Hs	biological process
identical protein binding	Hs	molecular function
sequence-specific DNA binding	Hs	molecular function
membrane raft	Hs	cellular component
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
cellular response to hydrogen peroxide	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	209	1.31e-56
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	209	1.31e-56
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	290	1.87e-85
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	290	1.87e-85
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	290	1.87e-85
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	209	1.31e-56
DNA binding	Hs	molecular function	290	1.87e-85
chromatin binding	Hs	molecular function	290	1.87e-85
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	290	1.87e-85
protein tyrosine kinase activity	Hs	molecular function	290	1.87e-85
signal transducer activity	Hs	molecular function	290	1.87e-85
protein binding	Hs	molecular function	290	1.87e-85
nucleus	Hs	cellular component	290	1.87e-85
nucleoplasm	Hs	cellular component	290	1.87e-85
cytoplasm	Hs	cellular component	290	1.87e-85
cytosol	Hs	cellular component	290	1.87e-85
protein phosphatase binding	Hs	molecular function	209	1.31e-56
nuclear membrane	Hs	cellular component	209	1.31e-56
glucocorticoid receptor binding	Hs	molecular function	290	1.87e-85
identical protein binding	Hs	molecular function	209	1.31e-56
sequence-specific DNA binding	Hs	molecular function	209	1.31e-56
membrane raft	Hs	cellular component	209	1.31e-56
protein dimerization activity	Hs	molecular function	290	1.87e-85

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
DNA binding	Pfam	molecular function	5.8E-79
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	6.3E-207
signal transducer activity	PANTHER	molecular function	6.3E-207
nucleus	PANTHER	cellular component	6.3E-207
regulation of transcription, DNA-templated	PANTHER	biological process	6.3E-207
signal transduction	PANTHER	biological process	6.3E-207

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences