Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000005082

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

cieg069f15

Plate: R1CiGC40i19

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term	Analysis	Definition
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
AAA+_ATPase	SMART	AAA+ ATPase domain
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
C2_domain_sf	Gene3D	C2 domain superfamily
Helicase_C	SMART	Helicase, C-terminal
Helicase_C	Pfam	Helicase, C-terminal
Ig_E-set	SUPERFAMILY	Immunoglobulin E-set
Sec63-dom	SMART	Sec63 domain
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
Helicase_C	CDD	Helicase, C-terminal
Sec63-dom	Pfam	Sec63 domain

GOSlim

22 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
membrane	Orthology	cellular component
hydrolase activity	Orthology	molecular function
identical protein binding	Orthology	molecular function
cell differentiation	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
organelle organization	Blast	biological process

GO (Orthology)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
mRNA splicing, via spliceosome	Hs	biological process
osteoblast differentiation	Hs	biological process
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
spliceosomal complex	Hs	cellular component
U5 snRNP	Hs	cellular component
mRNA processing	Hs	biological process
ATP-dependent helicase activity	Hs	molecular function
RNA splicing	Hs	biological process
membrane	Hs	cellular component
hydrolase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
identical protein binding	Hs	molecular function
U4/U6 x U5 tri-snRNP complex	Hs	cellular component
catalytic step 2 spliceosome	Hs	cellular component

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	3460	0.0
nucleic acid binding	Hs	molecular function	3460	0.0
RNA binding	Hs	molecular function	3460	0.0
ATP-dependent RNA helicase activity	Hs	molecular function	3460	0.0
helicase activity	Hs	molecular function	3460	0.0
protein binding	Hs	molecular function	3460	0.0
ATP binding	Hs	molecular function	3460	0.0
intracellular	Hs	cellular component	1521	0.0
nucleus	Hs	cellular component	3460	0.0
nucleoplasm	Hs	cellular component	3460	0.0
spliceosomal complex	Hs	cellular component	3460	0.0
U5 snRNP	Hs	cellular component	3460	0.0
nucleolus	Hs	cellular component	328	1.84e-91
cytoplasm	Hs	cellular component	328	1.84e-91
cytosol	Hs	cellular component	1521	0.0
ATP-dependent helicase activity	Hs	molecular function	3460	0.0
membrane	Hs	cellular component	3460	0.0
hydrolase activity	Hs	molecular function	3460	0.0
intracellular ribonucleoprotein complex	Hs	cellular component	3460	0.0
identical protein binding	Hs	molecular function	3460	0.0
ATP-dependent 3'-5' DNA helicase activity	Hs	molecular function	1521	0.0
U4/U6 x U5 tri-snRNP complex	Hs	cellular component	3460	0.0
catalytic step 2 spliceosome	Hs	cellular component	3460	0.0
activating signal cointegrator 1 complex	Hs	cellular component	1521	0.0

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.1E-24
ATP binding	Pfam	molecular function	1.1E-24

Gene Card

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Transcript Models and Sequences