Aniseed - Gene card

Gene Card

Best human hits

ATP5F1B; ATP6V1A; ATP6V1B1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006081

Gene Model ID

KH2012:KH.C3.87

Location

KhC3:6534321..6542511

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000015264
NCBI Reference Sequence	XM_002128184.4
NCBI Reference Sequence	XM_009859801.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

ciad058g18

Plate: R1CiGC06c05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
ATPase_F1/V1_b/a_C	Gene3D	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal
AAA+_ATPase	SMART	AAA+ ATPase domain
ATPase_F1/V1/A1_a/bsu_N	Pfam	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
ATP_synth_F1_bsu	Hamap	ATP synthase, F1 complex, beta subunit
ATPase_a/bsu_AS	ProSitePatterns	ATPase, alpha/beta subunit, nucleotide-binding domain, active site
ATP_synth_F1_bsu	TIGRFAM	ATP synthase, F1 complex, beta subunit
ATPase_F1/V1/A1_a/bsu_N_sf	SUPERFAMILY	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily
ATPase_F1/V1/A1_a/bsu_nucl-bd	Pfam	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

42 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
mitochondrial matrix	Blast	cellular component
lysosomal membrane	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
cell surface	Blast	cellular component
endomembrane system	Blast	cellular component
membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
mitochondrial membrane	Blast	cellular component
myelin sheath	Blast	cellular component
extracellular exosome	Blast	cellular component
membrane part	Blast	cellular component
macromolecular complex	Blast	cellular component
plasma membrane region	Blast	cellular component
cell projection	Blast	cellular component
cytoskeletal part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
synapse part	Blast	cellular component
neuron part	Blast	cellular component
transmembrane transport	Blast	biological process
monovalent inorganic cation transport	Blast	biological process
plasma membrane part	Blast	cellular component
vacuolar membrane	Blast	cellular component
nucleoside-triphosphatase activity	Blast	molecular function
receptor binding	Blast	molecular function
intracellular non-membrane-bounded organelle	Blast	cellular component
intracellular part	Blast	cellular component
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle part	Blast	cellular component
phosphate-containing compound metabolic process	InterProScan	biological process
metabolic process	InterProScan	biological process

GO (Orthology)