Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000013482
NCBI Reference Sequence	XM_009860066.2

Collections

Gene collection 1 (N. Satoh)

1 result

cicl044p17

Plate: R1CiGC13e07

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
NFYA	PANTHER	Nuclear transcription factor Y subunit A
NFYA	Pfam	Nuclear transcription factor Y subunit A
NFYA	SMART	Nuclear transcription factor Y subunit A
NFYA	PRINTS	Nuclear transcription factor Y subunit A
NFYA	ProSiteProfiles	Nuclear transcription factor Y subunit A
CCAAT-binding_factor_CS	ProSitePatterns	CCAAT-binding factor, conserved site

GOSlim

16 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region sequence-specific DNA binding	Orthology	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
core promoter sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
CCAAT-binding factor complex	Hs	cellular component
protein-DNA complex	Hs	cellular component
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
rhythmic process	Hs	biological process
RNA polymerase II transcription factor complex	Hs	cellular component

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	148	1.33e-40
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	148	1.33e-40
core promoter sequence-specific DNA binding	Hs	molecular function	148	1.33e-40
DNA binding	Hs	molecular function	148	1.33e-40
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	148	1.33e-40
protein binding	Hs	molecular function	148	1.33e-40
nucleus	Hs	cellular component	148	1.33e-40
nucleoplasm	Hs	cellular component	148	1.33e-40
CCAAT-binding factor complex	Hs	cellular component	148	1.33e-40
protein-DNA complex	Hs	cellular component	148	1.33e-40
transcription regulatory region DNA binding	Hs	molecular function	148	1.33e-40
RNA polymerase II transcription factor complex	Hs	cellular component	148	1.33e-40

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	ProSitePatterns	molecular function
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	1.3E-63
regulation of transcription, DNA-templated	PANTHER	biological process	1.3E-63
CCAAT-binding factor complex	ProSitePatterns	cellular component

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