Aniseed - Gene card

Gene Card

Best human hits

FBL; FBLL1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006489

Gene Model ID

KH2012:KH.C4.401

Location

KhC4:3614028..3616402

Transcript Models and Sequences

KH2012:KH.C4.401.v1.R.ND1-1
KH2012:KH.C4.401.v2.A.SL2-1
KH2012:KH.C4.401.v3.A.nonSL4-1
KH2012:KH.C4.401.v3.A.nonSL6-1
KH2012:KH.C4.401.v3.A.nonSL7-1
KH2012:KH.C4.401.v3.A.nonSL8-1
KH2012:KH.C4.401.v3.A.SL3-1
KH2012:KH.C4.401.v3.A.SL5-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000005048
NCBI Reference Sequence	XM_002131181.4
NCBI Reference Sequence	XM_018811545.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb040e18

Plate: R1CiGC32j04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Fibrillarin	Hamap	Fibrillarin
SAM-dependent_MTases	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferase
Fibrillarin	PRINTS	Fibrillarin
Fibrillarin	PIRSF	Fibrillarin
Fibrillarin_CS	ProSitePatterns	Fibrillarin, conserved site
Fibrillarin	Pfam	Fibrillarin
Fibrillarin	SMART	Fibrillarin

GOSlim

19 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
RNA processing	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
cell differentiation	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
metabolic process	Orthology	biological process
nuclear body	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Orthology	molecular function
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process

GO (Orthology)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
box C/D snoRNA 3'-end processing	Hs	biological process
TFIID-class transcription factor binding	Hs	molecular function
osteoblast differentiation	Hs	biological process
fibrillar center	Hs	cellular component
dense fibrillar component	Hs	cellular component
granular component	Hs	cellular component
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
nucleolus	Hs	cellular component
rRNA processing	Hs	biological process
tRNA processing	Hs	biological process
methyltransferase activity	Hs	molecular function
rRNA methyltransferase activity	Hs	molecular function
Cajal body	Hs	cellular component
membrane	Hs	cellular component
transferase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
rRNA methylation	Hs	biological process
box C/D snoRNP complex	Hs	cellular component
small-subunit processome	Hs	cellular component
methylation	Hs	biological process
ATPase binding	Hs	molecular function
extracellular exosome	Hs	cellular component
histone glutamine methylation	Hs	biological process
histone-glutamine methyltransferase activity	Hs	molecular function

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
TFIID-class transcription factor binding	Hs	molecular function	424	3.24e-150
fibrillar center	Hs	cellular component	424	3.24e-150
dense fibrillar component	Hs	cellular component	424	3.24e-150
granular component	Hs	cellular component	424	3.24e-150
RNA binding	Hs	molecular function	424	3.24e-150
protein binding	Hs	molecular function	424	3.24e-150
nucleus	Hs	cellular component	424	3.24e-150
nucleoplasm	Hs	cellular component	424	3.24e-150
chromosome	Hs	cellular component	424	3.24e-150
nucleolus	Hs	cellular component	424	3.24e-150
methyltransferase activity	Hs	molecular function	424	3.24e-150
rRNA methyltransferase activity	Hs	molecular function	424	3.24e-150
Cajal body	Hs	cellular component	424	3.24e-150
membrane	Hs	cellular component	424	3.24e-150
transferase activity	Hs	molecular function	424	3.24e-150
intracellular ribonucleoprotein complex	Hs	cellular component	424	3.24e-150
box C/D snoRNP complex	Hs	cellular component	424	3.24e-150
small-subunit processome	Hs	cellular component	424	3.24e-150
ATPase binding	Hs	molecular function	424	3.24e-150
extracellular exosome	Hs	cellular component	424	3.24e-150
histone-glutamine methyltransferase activity	Hs	molecular function	424	3.24e-150

GO (InterProScan)