Aniseed - Gene card

Gene Card

Best human hits

CCDC138; CREB3L1; XBP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006614

Gene Model ID

KH2012:KH.C4.516

Location

KhC4:3662690..3665500

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000005067
NCBI Reference Sequence	NM_001078380.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cilv019g05

Plate: R1CiGC26p13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
bZIP	ProSitePatterns	Basic-leucine zipper domain
bZIP	Pfam	Basic-leucine zipper domain
bZIP	ProSiteProfiles	Basic-leucine zipper domain
bZIP	SMART	Basic-leucine zipper domain

GOSlim

54 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
angiogenesis	Orthology	biological process
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
cell	Orthology	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
apoptotic process	Orthology	biological process
immune response	Orthology	biological process
multicellular organism development	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cell differentiation	Orthology	biological process
identical protein binding	Orthology	molecular function
negative regulation of apoptotic process	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
neuron development	Orthology	biological process
transcription factor binding	Orthology	molecular function
transcription regulatory region sequence-specific DNA binding	Orthology	molecular function
animal organ development	Orthology	biological process
cell proliferation	Orthology	biological process
cell development	Orthology	biological process
immune system process	Orthology	biological process
proteolysis	Orthology	biological process
organic substance metabolic process	Orthology	biological process
cellular biosynthetic process	Orthology	biological process
response to stress	Orthology	biological process
response to organic substance	Orthology	biological process
signal transduction	Orthology	biological process
cellular response to organic substance	Orthology	biological process
cellular response to stress	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
cell migration	Orthology	biological process
cell communication	Orthology	biological process
cell adhesion	Orthology	biological process
intracellular signal transduction	Orthology	biological process
response to lipopolysaccharide	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

67 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
core promoter binding	Hs	molecular function
RNA polymerase II transcription factor binding	Hs	molecular function
enhancer sequence-specific DNA binding	Hs	molecular function
angiogenesis	Hs	biological process
liver development	Hs	biological process
endothelial cell proliferation	Hs	biological process
epithelial cell maturation	Hs	biological process
positive regulation of immunoglobulin production	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
cell	Hs	cellular component
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
ubiquitin-dependent protein catabolic process	Hs	biological process
lipid metabolic process	Hs	biological process
fatty acid biosynthetic process	Hs	biological process
autophagy	Hs	biological process
apoptotic process	Hs	biological process
immune response	Hs	biological process
response to unfolded protein	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	Hs	biological process
multicellular organism development	Hs	biological process
muscle organ development	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
regulation of autophagy	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
cell differentiation	Hs	biological process
positive regulation of cell migration	Hs	biological process
endoplasmic reticulum unfolded protein response	Hs	biological process
exocrine pancreas development	Hs	biological process
protein destabilization	Hs	biological process
cellular response to insulin stimulus	Hs	biological process
ATF6-mediated unfolded protein response	Hs	biological process
cellular response to glucose starvation	Hs	biological process
glucose homeostasis	Hs	biological process
cholesterol homeostasis	Hs	biological process
identical protein binding	Hs	molecular function
negative regulation of apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of B cell differentiation	Hs	biological process
positive regulation of T cell differentiation	Hs	biological process
positive regulation of fat cell differentiation	Hs	biological process
positive regulation of angiogenesis	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein heterodimerization activity	Hs	molecular function
neuron development	Hs	biological process
fatty acid homeostasis	Hs	biological process
sterol homeostasis	Hs	biological process
adipose tissue development	Hs	biological process
intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Hs	biological process
cellular response to lipopolysaccharide	Hs	biological process
cellular response to amino acid stimulus	Hs	biological process
cellular response to glucose stimulus	Hs	biological process
positive regulation of proteasomal protein catabolic process	Hs	biological process
negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway	Hs	biological process

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	92.4	2.56e-20
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	92.4	2.56e-20
core promoter binding	Hs	molecular function	92.4	2.56e-20
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	45.4	6.53e-05
RNA polymerase II transcription factor binding	Hs	molecular function	92.4	2.56e-20
enhancer sequence-specific DNA binding	Hs	molecular function	92.4	2.56e-20
DNA binding	Hs	molecular function	92.4	2.56e-20
chromatin binding	Hs	molecular function	45.4	6.53e-05
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	92.4	2.56e-20
protein binding	Hs	molecular function	92.4	2.56e-20
intracellular	Hs	cellular component	92.4	2.56e-20
cell	Hs	cellular component	92.4	2.56e-20
nucleus	Hs	cellular component	92.4	2.56e-20
nucleoplasm	Hs	cellular component	92.4	2.56e-20
cytoplasm	Hs	cellular component	92.4	2.56e-20
endoplasmic reticulum	Hs	cellular component	92.4	2.56e-20
endoplasmic reticulum membrane	Hs	cellular component	92.4	2.56e-20
membrane	Hs	cellular component	92.4	2.56e-20
integral component of membrane	Hs	cellular component	92.4	2.56e-20
cAMP response element binding	Hs	molecular function	45.4	6.53e-05
identical protein binding	Hs	molecular function	92.4	2.56e-20
sequence-specific DNA binding	Hs	molecular function	92.4	2.56e-20
transcription regulatory region DNA binding	Hs	molecular function	45.4	6.53e-05
SMAD binding	Hs	molecular function	45.4	6.53e-05
protein heterodimerization activity	Hs	molecular function	92.4	2.56e-20

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	1.2E-6
regulation of transcription, DNA-templated	SMART	biological process	1.2E-6

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien102180

cima865899

Gene collection 1 (N. Satoh)

cicl008m09

cilv019g05

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)