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Gene Card

Best human hits

PAFAH1B2; PAFAH1B3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006741

Gene Model ID

KH2012:KH.C4.633

Location

KhC4:1753856..1755563

Transcript Models and Sequences

  KH2012:KH.C4.633.v1.A.SL1-1
KH2012:KH.C4.633.v1.A.SL2-1
KH2012:KH.C4.633.v2.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000013608
NCBI Reference Sequence XM_002130748.4
Collections

Gateway full ORF

1 result

cima877243

Plate: VES68_K03

Gene collection 1 (N. Satoh)

1 result

cieg039p06

Plate: R1CiGC21j14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SGNH_hydro Pfam SGNH hydrolase-type esterase domain
SGNH_hydro_sf Gene3D SGNH hydrolase superfamily

GOSlim

21 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
spermatogenesis Orthology biological process
nervous system development Orthology biological process
brain development Orthology biological process
membrane Orthology cellular component
hydrolase activity Orthology molecular function
identical protein binding Orthology molecular function
protein homodimerization activity Orthology molecular function
protein heterodimerization activity Orthology molecular function
extracellular exosome Orthology cellular component
organic substance metabolic process Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
transferase activity Orthology molecular function

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
fibrillar center Hs cellular component
1-alkyl-2-acetylglycerophosphocholine esterase activity Hs molecular function
phospholipase A2 activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
lipid metabolic process Hs biological process
spermatogenesis Hs biological process
nervous system development Hs biological process
brain development Hs biological process
membrane Hs cellular component
lipid catabolic process Hs biological process
positive regulation of macroautophagy Hs biological process
hydrolase activity Hs molecular function
secretory granule lumen Hs cellular component
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
protein heterodimerization activity Hs molecular function
platelet-activating factor acetyltransferase activity Hs molecular function
extracellular exosome Hs cellular component
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fibrillar center Hs cellular component 178 2.33e-56
1-alkyl-2-acetylglycerophosphocholine esterase activity Hs molecular function 178 2.33e-56
phospholipase A2 activity Hs molecular function 178 2.33e-56
protein binding Hs molecular function 178 2.33e-56
extracellular region Hs cellular component 178 2.33e-56
nucleolus Hs cellular component 178 2.33e-56
cytoplasm Hs cellular component 178 2.33e-56
cytosol Hs cellular component 178 2.33e-56
plasma membrane Hs cellular component 178 2.33e-56
membrane Hs cellular component 175 4.25e-55
hydrolase activity Hs molecular function 178 2.33e-56
secretory granule lumen Hs cellular component 178 2.33e-56
identical protein binding Hs molecular function 175 4.25e-55
protein homodimerization activity Hs molecular function 178 2.33e-56
protein heterodimerization activity Hs molecular function 178 2.33e-56
platelet-activating factor acetyltransferase activity Hs molecular function 178 2.33e-56
extracellular exosome Hs cellular component 178 2.33e-56
ficolin-1-rich granule lumen Hs cellular component 178 2.33e-56

GO (InterProScan)

No result

GO Term Analysis Type e-value

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