Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020811
NCBI Reference Sequence	XM_002128536.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg045f15

Plate: R1CiGC22h10

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Mediator_Med21	Pfam	Mediator complex, subunit Med21
Med7/Med21-like	SUPERFAMILY	Mediator complex, subunit Med7/Med21-like
Mediator_Med21	PANTHER	Mediator complex, subunit Med21

GOSlim

15 results

GO Term	Annotation Origin	Type
transcription coactivator activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
protein ubiquitination	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transferase activity, transferring phosphorus-containing groups	Orthology	molecular function
RNA biosynthetic process	Orthology	biological process
nucleoplasm part	Orthology	cellular component
developmental process	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
ubiquitin ligase complex	Hs	cellular component
RNA polymerase II transcription cofactor activity	Hs	molecular function
transcription coactivator activity	Hs	molecular function
DNA-directed 5'-3' RNA polymerase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein ubiquitination	Hs	biological process
mediator complex	Hs	cellular component
stem cell population maintenance	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	143	1.92e-44
RNA polymerase II transcription cofactor activity	Hs	molecular function	143	1.92e-44
transcription coactivator activity	Hs	molecular function	143	1.92e-44
DNA-directed 5'-3' RNA polymerase activity	Hs	molecular function	143	1.92e-44
protein binding	Hs	molecular function	143	1.92e-44
nucleus	Hs	cellular component	143	1.92e-44
mediator complex	Hs	cellular component	143	1.92e-44
ubiquitin protein ligase activity	Hs	molecular function	143	1.92e-44

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
mediator complex	SUPERFAMILY	cellular component	1.86E-27

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences