Aniseed - Gene card

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Homeobox_dom	SMART	Homeobox domain
Homeobox_dom	Pfam	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox_CS	ProSitePatterns	Homeobox, conserved site

GOSlim

32 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
axon guidance	Orthology	biological process
visual perception	Orthology	biological process
cell differentiation	Orthology	biological process
macromolecular complex	Orthology	cellular component
sequence-specific DNA binding	Orthology	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
response to stimulus	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process
animal organ development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
brain development	Orthology	biological process
receptor binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
cellular response to organic substance	Orthology	biological process
neuron differentiation	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process

GO (Orthology)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
axon guidance	Hs	biological process
visual perception	Hs	biological process
circadian rhythm	Hs	biological process
eukaryotic initiation factor 4E binding	Hs	molecular function
regulation of smoothened signaling pathway	Hs	biological process
animal organ morphogenesis	Hs	biological process
anterior/posterior pattern specification	Hs	biological process
cell differentiation	Hs	biological process
growth cone	Hs	cellular component
forebrain development	Hs	biological process
midbrain development	Hs	biological process
macromolecular complex	Hs	cellular component
nuclear hormone receptor binding	Hs	molecular function
positive regulation of embryonic development	Hs	biological process
regulation of fibroblast growth factor receptor signaling pathway	Hs	biological process
inner ear morphogenesis	Hs	biological process
leucine zipper domain binding	Hs	molecular function
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
response to stimulus	Hs	biological process
dopaminergic neuron differentiation	Hs	biological process
primitive streak formation	Hs	biological process
positive regulation of gastrulation	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	164	6.32e-47
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	164	6.32e-47
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	164	6.32e-47
DNA binding	Hs	molecular function	164	6.32e-47
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	164	6.32e-47
protein binding	Hs	molecular function	164	6.32e-47
nucleus	Hs	cellular component	164	6.32e-47
eukaryotic initiation factor 4E binding	Hs	molecular function	163	4.11e-47
growth cone	Hs	cellular component	163	4.11e-47
macromolecular complex	Hs	cellular component	163	4.11e-47
nuclear hormone receptor binding	Hs	molecular function	129	4.13e-34
leucine zipper domain binding	Hs	molecular function	129	4.13e-34
sequence-specific DNA binding	Hs	molecular function	164	6.32e-47

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	1.2E-23
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Gateway full ORF

cien60357

cien185218

Gene collection 1 (N. Satoh)

cicl045e03

citb070l07

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)