Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000005480
ENSEMBL	ENSCING00000005483
ENSEMBL	ENSCING00000013656
NCBI Reference Sequence	XM_018811461.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

cign044g10

Plate: R1CiGC42o16

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term	Analysis	Definition
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
SET_dom	ProSiteProfiles	SET domain
RRM_dom	Pfam	RNA recognition motif domain
Post-SET_dom	SMART	Post-SET domain
SETD1B	PANTHER	Histone-lysine N-methyltransferase SETD1B
COMPASS_Set1_N-SET	SMART	COMPASS complex Set1 subunit, N-SET domain
Post-SET_dom	ProSiteProfiles	Post-SET domain
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom	ProSiteProfiles	RNA recognition motif domain
COMPASS_Set1_N-SET	Pfam	COMPASS complex Set1 subunit, N-SET domain
SET_dom	SMART	SET domain
RRM_dom	SMART	RNA recognition motif domain
SET_dom	Pfam	SET domain
SETD1-like	PANTHER	Histone-lysine N-methyltransferase SETD1-like

GOSlim

36 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription factor binding	Blast	molecular function
zinc ion binding	Blast	molecular function
nuclear speck	Blast	cellular component
transferase activity	Orthology	molecular function
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
positive regulation of cell proliferation	Orthology	biological process
organelle organization	Orthology	biological process
metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell development	Orthology	biological process
gamete generation	Orthology	biological process
negative regulation of transcription, DNA-templated	Orthology	biological process
response to stimulus	Orthology	biological process
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
transcription regulatory region sequence-specific DNA binding	Blast	molecular function
sequence-specific double-stranded DNA binding	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
methyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
histone-lysine N-methyltransferase activity	Hs	molecular function
methylation	Hs	biological process
histone lysine methylation	Hs	biological process
histone methyltransferase complex	Hs	cellular component
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
histone H3-K4 methylation	Hs	biological process
oocyte growth	Hs	biological process
chromatin silencing	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
transferase activity, transferring acyl groups	Hs	molecular function
response to estrogen	Hs	biological process
MLL3/4 complex	Hs	cellular component
oogenesis	Hs	biological process

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	309	5.72e-85
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	169	1.22e-41
core promoter sequence-specific DNA binding	Hs	molecular function	169	1.22e-41
nucleic acid binding	Hs	molecular function	315	1.31e-86
DNA binding	Hs	molecular function	169	1.22e-41
AT DNA binding	Hs	molecular function	169	1.22e-41
chromatin binding	Hs	molecular function	169	1.22e-41
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	169	1.22e-41
RNA binding	Hs	molecular function	315	1.31e-86
protein binding	Hs	molecular function	315	1.31e-86
nucleus	Hs	cellular component	315	1.31e-86
nucleoplasm	Hs	cellular component	315	1.31e-86
chromosome	Hs	cellular component	315	1.31e-86
cytosol	Hs	cellular component	315	1.31e-86
beta-catenin binding	Hs	molecular function	309	5.72e-85
transcription factor binding	Hs	molecular function	309	5.72e-85
methyltransferase activity	Hs	molecular function	315	1.31e-86
zinc ion binding	Hs	molecular function	169	1.22e-41
nuclear speck	Hs	cellular component	315	1.31e-86
transferase activity	Hs	molecular function	315	1.31e-86
histone-lysine N-methyltransferase activity	Hs	molecular function	315	1.31e-86
histone methyltransferase complex	Hs	cellular component	315	1.31e-86
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function	315	1.31e-86
identical protein binding	Hs	molecular function	169	1.22e-41
protein homodimerization activity	Hs	molecular function	169	1.22e-41
transcription regulatory region DNA binding	Hs	molecular function	169	1.22e-41
unmethylated CpG binding	Hs	molecular function	169	1.22e-41
metal ion binding	Hs	molecular function	169	1.22e-41
Set1C/COMPASS complex	Hs	cellular component	315	1.31e-86
lysine-acetylated histone binding	Hs	molecular function	169	1.22e-41
MLL1 complex	Hs	cellular component	169	1.22e-41

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	3.66E-15
protein binding	SMART	molecular function	3.2E-33
histone-lysine N-methyltransferase activity	PANTHER	molecular function	5.7E-160
histone methyltransferase activity (H3-K4 specific)	PANTHER	molecular function	7.7E-106
Set1C/COMPASS complex	PANTHER	cellular component	5.7E-160
histone H3-K4 methylation	PANTHER	biological process	5.7E-160

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences