Aniseed - Gene card

Gene Card

Best human hits

FAM186A; NUCB1; NUCB2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006994

Gene Model ID

KH2012:KH.C5.134

Location

KhC5:1075684..1084013

Transcript Models and Sequences

KH2012:KH.C5.134.v1.A.SL3-1
KH2012:KH.C5.134.v1.A.SL4-1
KH2012:KH.C5.134.v1.A.SL5-1
KH2012:KH.C5.134.v2.A.SL1-1
KH2012:KH.C5.134.v2.A.SL2-1
KH2012:KH.C5.134.v2.A.SL6-1
KH2012:KH.C5.134.v3.A.SL1-1
KH2012:KH.C5.134.v3.A.SL2-1
KH2012:KH.C5.134.v3.A.SL6-1
KH2012:KH.C5.134.v4.A.SL3-1
KH2012:KH.C5.134.v4.A.SL4-1
KH2012:KH.C5.134.v4.A.SL5-1

External Database Gene Card

External database links

7 results

Database	Gene ID
ENSEMBL	ENSCING00000003734
NCBI Reference Sequence	XM_009860290.2
NCBI Reference Sequence	XM_009860291.2
NCBI Reference Sequence	XM_009860292.2
NCBI Reference Sequence	XM_018811846.1
NCBI Reference Sequence	XM_018812094.1
NCBI Reference Sequence	XM_018812095.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg037p03

Plate: R1CiGC21f21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
EF_hand_dom	Pfam	EF-hand domain
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF_hand_dom	CDD	EF-hand domain
EF_Hand_1_Ca_BS	ProSitePatterns	EF-Hand 1, calcium-binding site
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair
EF_hand_dom	SMART	EF-hand domain

GOSlim

21 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
early endosome	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
membrane	Orthology	cellular component
metal ion binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
Golgi apparatus part	Orthology	cellular component
Golgi membrane	Orthology	cellular component
cellular protein modification process	Orthology	biological process
membrane part	Orthology	cellular component

GO (Orthology)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G-protein alpha-subunit binding	Hs	molecular function
DNA binding	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
early endosome	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
rough endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component
Golgi apparatus	Hs	cellular component
Golgi-associated vesicle	Hs	cellular component
cis-Golgi network	Hs	cellular component
trans-Golgi network	Hs	cellular component
membrane	Hs	cellular component
Golgi cisterna membrane	Hs	cellular component
post-translational protein modification	Hs	biological process
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component
extrinsic component of Golgi membrane	Hs	cellular component
lumenal side of Golgi membrane	Hs	cellular component

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
G-protein alpha-subunit binding	Hs	molecular function	257	9.71e-79
DNA binding	Hs	molecular function	257	9.71e-79
calcium ion binding	Hs	molecular function	288	4.11e-91
protein binding	Hs	molecular function	257	9.71e-79
extracellular region	Hs	cellular component	257	9.71e-79
extracellular space	Hs	cellular component	257	9.71e-79
nucleus	Hs	cellular component	257	9.71e-79
cytoplasm	Hs	cellular component	257	9.71e-79
early endosome	Hs	cellular component	257	9.71e-79
endoplasmic reticulum lumen	Hs	cellular component	257	9.71e-79
rough endoplasmic reticulum	Hs	cellular component	257	9.71e-79
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	257	9.71e-79
Golgi apparatus	Hs	cellular component	257	9.71e-79
Golgi-associated vesicle	Hs	cellular component	257	9.71e-79
cis-Golgi network	Hs	cellular component	257	9.71e-79
trans-Golgi network	Hs	cellular component	257	9.71e-79
membrane	Hs	cellular component	257	9.71e-79
Golgi cisterna membrane	Hs	cellular component	257	9.71e-79
metal ion binding	Hs	molecular function	257	9.71e-79
extracellular exosome	Hs	cellular component	257	9.71e-79
extrinsic component of Golgi membrane	Hs	cellular component	257	9.71e-79
lumenal side of Golgi membrane	Hs	cellular component	257	9.71e-79

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
calcium ion binding	Pfam	molecular function	7.0E-11