Aniseed - Gene card

Gene Card

Best human hits

A2M; CD109; PZP

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007022

Gene Model ID

KH2012:KH.C5.16

Location

KhC5:4071772..4099083

Transcript Models and Sequences

KH2012:KH.C5.16.v1.A.SL1-1
KH2012:KH.C5.16.v1.A.SL3-1
KH2012:KH.C5.16.v2.A.SL1-2
KH2012:KH.C5.16.v2.A.SL3-2
KH2012:KH.C5.16.v3.R.ND2-1
KH2012:KH.C5.16.v4.A.SL4-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000018908
NCBI Reference Sequence	XM_009860376.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

4 results

ciht012m09

Plate: R1CiGC43o24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

18 results

IPR Term	Analysis	Definition
A2M_N_2	Pfam	Alpha-2-macroglobulin, N-terminal 2
MacrogloblnA2_thiol-ester-bond	Pfam	Alpha-2-macroglobulin, thiol-ester bond-forming
A2M_N_2	SMART	Alpha-2-macroglobulin, N-terminal 2
A2M_comp	Pfam	Alpha-macroglobulin complement component
A2M_N	Pfam	Alpha-2-macroglobulin, N-terminal
Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
Macroglobln_a2	Pfam	Alpha-2-macroglobulin
Macroglobln_a2	SMART	Alpha-2-macroglobulin
A-macroglobulin_rcpt-bd_sf	SUPERFAMILY	Alpha-macroglobulin, receptor-binding domain superfamily
A-macroglobulin_rcpt-bd	SMART	Alpha-macroglobulin, receptor-binding
Ig-like_fold	Gene3D	Immunoglobulin-like fold
A-macroglobulin_rcpt-bd	Pfam	Alpha-macroglobulin, receptor-binding
A-macroglobulin_rcpt-bd_sf	Gene3D	Alpha-macroglobulin, receptor-binding domain superfamily
MacrogloblnA2_CS	ProSitePatterns	Alpha-2-macroglobulin, conserved site
TSP1_rpt_sf	SUPERFAMILY	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf	Gene3D	Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt	ProSiteProfiles	Thrombospondin type-1 (TSP1) repeat
ConA-like_dom_sf	SUPERFAMILY	Concanavalin A-like lectin/glucanase domain superfamily

GOSlim

22 results

GO Term	Annotation Origin	Type
GTPase activator activity	Blast	molecular function
receptor binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
cell surface	Blast	cellular component
membrane	Blast	cellular component
enzyme binding	Blast	molecular function
extracellular exosome	Blast	cellular component
endopeptidase activity	Blast	molecular function
enzyme regulator activity	Blast	molecular function
serine-type endopeptidase activity	Blast	molecular function
peptidase activity	Blast	molecular function
whole membrane	Blast	cellular component
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
intrinsic component of membrane	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	400	1.11e-116
endopeptidase inhibitor activity	Hs	molecular function	654	0.0
serine-type endopeptidase inhibitor activity	Hs	molecular function	654	0.0
GTPase activator activity	Hs	molecular function	400	1.11e-116
receptor binding	Hs	molecular function	400	1.11e-116
protein binding	Hs	molecular function	400	1.11e-116
extracellular region	Hs	cellular component	654	0.0
extracellular space	Hs	cellular component	654	0.0
cytosol	Hs	cellular component	400	1.11e-116
plasma membrane	Hs	cellular component	654	0.0
cell surface	Hs	cellular component	654	0.0
membrane	Hs	cellular component	654	0.0
growth factor binding	Hs	molecular function	400	1.11e-116
enzyme binding	Hs	molecular function	400	1.11e-116
interleukin-8 binding	Hs	molecular function	400	1.11e-116
interleukin-1 binding	Hs	molecular function	400	1.11e-116
peptidase inhibitor activity	Hs	molecular function	654	0.0
platelet alpha granule membrane	Hs	cellular component	654	0.0
platelet alpha granule lumen	Hs	cellular component	400	1.11e-116
anchored component of membrane	Hs	cellular component	654	0.0
tumor necrosis factor binding	Hs	molecular function	400	1.11e-116
calcium-dependent protein binding	Hs	molecular function	400	1.11e-116
transforming growth factor beta binding	Hs	molecular function	654	0.0
extracellular exosome	Hs	cellular component	420	1.27e-123
blood microparticle	Hs	cellular component	420	1.27e-123

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
endopeptidase inhibitor activity	SMART	molecular function	9.7E-34
extracellular region	Gene3D	cellular component	4.4E-171
extracellular space	Pfam	cellular component	4.2E-70