Aniseed - Gene card

Gene Card

Best human hits

RPL32

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007029

Gene Model ID

KH2012:KH.C5.166

Location

KhC5:3392444..3393899

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000016152
NCBI Reference Sequence	NM_001032508.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

ciad044p10

Plate: R1CiGC04f22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Ribosomal_L32e	ProDom	Ribosomal protein L32e
Ribosomal_L32e_sf	SUPERFAMILY	Ribosomal protein L32e superfamily
Ribosomal_L32e	CDD	Ribosomal protein L32e
Ribosomal_L32e	Pfam	Ribosomal protein L32e
Ribosomal_L32e	SMART	Ribosomal protein L32e
Ribosomal_L32e	PANTHER	Ribosomal protein L32e
Ribosomal_L32e_CS	ProSitePatterns	Ribosomal protein L32e, conserved site

GOSlim

11 results

GO Term	Annotation Origin	Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Orthology	biological process
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
intracellular	Orthology	cellular component
cytosol	Orthology	cellular component
ribosome	Orthology	cellular component
translational initiation	Orthology	biological process
SRP-dependent cotranslational protein targeting to membrane	Orthology	biological process
membrane	Orthology	cellular component
RNA processing	Orthology	biological process
intracellular organelle part	Orthology	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
cytoplasmic translation	Hs	biological process
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
intracellular	Hs	cellular component
cytosol	Hs	cellular component
ribosome	Hs	cellular component
rRNA processing	Hs	biological process
translation	Hs	biological process
translational initiation	Hs	biological process
SRP-dependent cotranslational protein targeting to membrane	Hs	biological process
membrane	Hs	cellular component
cytosolic large ribosomal subunit	Hs	cellular component
intracellular ribonucleoprotein complex	Hs	cellular component
polysomal ribosome	Hs	cellular component

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	180	1.91e-59
structural constituent of ribosome	Hs	molecular function	180	1.91e-59
intracellular	Hs	cellular component	180	1.91e-59
cytosol	Hs	cellular component	180	1.91e-59
ribosome	Hs	cellular component	180	1.91e-59
membrane	Hs	cellular component	180	1.91e-59
cytosolic large ribosomal subunit	Hs	cellular component	180	1.91e-59
intracellular ribonucleoprotein complex	Hs	cellular component	180	1.91e-59
polysomal ribosome	Hs	cellular component	180	1.91e-59

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	PANTHER	molecular function	3.2E-26
intracellular	PANTHER	cellular component	3.2E-26
ribosome	PANTHER	cellular component	3.2E-26
translation	PANTHER	biological process	3.2E-26